Factsheet for Zm00001d018487_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

mitochondrion 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, peroxisome, secretory
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	peroxisome

extracellular: 20408568
plasma membrane: 23508561
mitochondrion: 27297264
plasma membrane: 27341663

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

msms PMID: 23508561 doi

Z Zhang, P Voothuluru, M Yamaguchi, RE Sharp, SC Peck

Division of Biochemistry, University of Missouri Columbia, MO, USA ; Christopher S. Bond Life Sciences Center, University of Missouri Columbia, MO, USA ; Interdisciplinary Plant Group, University of Missouri Columbia, MO, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG31361	Sorghum	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	96.1	95.68
Os02t0817700-02	Rice	extracellular	87.64	90.18
TraesCS6B01G432600.1	Wheat	mitochondrion	88.29	88.48
TraesCS6A01G392400.2	Wheat	mitochondrion	88.07	87.31
HORVU6Hr1G091130.12	Barley	mitochondrion	85.03	85.03
Zm00001d049882_P001	Maize	cytosol, peroxisome, plastid	27.98	84.31
Zm00001d031930_P001	Maize	cytosol	37.96	82.16
GSMUA_Achr1P15360_001	Banana	mitochondrion	81.78	82.14
GSMUA_AchrUn_...	Banana	mitochondrion	82.0	81.64
GSMUA_Achr3P00300_001	Banana	mitochondrion	43.82	76.52
Zm00001d014093_P002	Maize	mitochondrion	75.49	75.49
Zm00001d003312_P001	Maize	mitochondrion, peroxisome, plastid	35.57	65.86
Zm00001d031212_P004	Maize	cytosol, peroxisome, plastid	29.93	34.41
Zm00001d047224_P003	Maize	cytosol	27.11	34.25
Zm00001d029416_P001	Maize	peroxisome	29.93	31.15
Zm00001d008432_P003	Maize	mitochondrion	29.28	29.61

Protein Annotations

EntrezGene:100192501	Gene3D:3.40.47.10	MapMan:5.7.3.2.3	ProteinID:AQK76213.1	UniProt:B4FBK8	EMBL:BT034496
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016740	GO:GO:0016746
GO:GO:0016747	InterPro:IPR016039	PFAM:PF00108	PFAM:PF02803	ScanProsite:PS00098	ScanProsite:PS00099
ScanProsite:PS00737	PFscan:PS51257	PANTHER:PTHR43853	PANTHER:PTHR43853:SF4	SUPFAM:SSF53901	TIGRFAMs:TIGR01930
InterPro:Thiolase	InterPro:Thiolase-like	InterPro:Thiolase_AS	InterPro:Thiolase_C	InterPro:Thiolase_CS	InterPro:Thiolase_N
InterPro:Thiolase_acyl_enz_int_AS	UniParc:UPI00017B690B	EnsemblPlantsGene:Zm00001d018487	EnsemblPlants:Zm00001d018487_P001	EnsemblPlants:Zm00001d018487_T001	SEG:seg

Description

3-ketoacyl-CoA thiolase 2 peroxisomal

Coordinates

chr5:-:221688156..221691939

Molecular Weight (calculated)

47961.6 Da

IEP (calculated)

8.401

GRAVY (calculated)

0.043

Length

461 amino acids

Sequence
(BLAST)

001: MEKAIDRQRV LLAHLLPSPS AASSQPQLAA SACAAGDSAA YQRSSSFGDD VVVVAAYRTP ICKAKRGGFK DTYPEDLLTV VLKAVLDNTR INPADIGDIV
101: VGTVLGPGSQ RANECRMAAL FAGFPETVPV RTVNRQCSSG LQAVADVAAA IKAGYYDIGI GAGLESMSIN SIAWEGQVNP KISAFQKAQD CLLPMGITSE
201: NVAHRYGVTR QEQDQAAAES HRRAAAATAS GKFKDEIVPV PTKIVDPKTG EEKEVVISVD DGIRPGTTAS GLAKLKPVFK KDGTTTAGNS SQVSDGAGAV
301: LLMKRSVALK KGLPILGVFR SFAAVGVDPA VMGVGPAVAI PAAVKSAGLE IGDIDLFELN EAFASQFVYC CNKLGLDRSK VNVNGGAIAL GHPLGATGAR
401: CVATLLNEMK RRGRDCRFGV VTMCIGSGMG AAAVFERGDA VDGLSNVRDI QAHNFLSKDA K

Best Arabidopsis Sequence Match ( AT2G33150.1 )
(BLAST)

001: MEKAIERQRV LLEHLRPSSS SSHNYEASLS ASACLAGDSA AYQRTSLYGD DVVIVAAHRT PLCKSKRGNF KDTYPDDLLA PVLRALIEKT NLNPSEVGDI
101: VVGTVLAPGS QRASECRMAA FYAGFPETVA VRTVNRQCSS GLQAVADVAA AIKAGFYDIG IGAGLESMTT NPMAWEGSVN PAVKKFAQAQ NCLLPMGVTS
201: ENVAQRFGVS RQEQDQAAVD SHRKAAAATA AGKFKDEIIP VKTKLVDPKT GDEKPITVSV DDGIRPTTTL ASLGKLKPVF KKDGTTTAGN SSQVSDGAGA
301: VLLMKRSVAM QKGLPVLGVF RTFAAVGVDP AIMGIGPAVA IPAAVKAAGL ELDDIDLFEI NEAFASQFVY CRNKLGLDPE KINVNGGAMA IGHPLGATGA
401: RCVATLLHEM KRRGKDCRFG VVSMCIGTGM GAAAVFERGD GVDELRNARK VEAQGLLSKD AR

Arabidopsis Description

PED1PKT3 [Source:UniProtKB/TrEMBL;Acc:A0A178VRP9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.