Factsheet for TraesCS6A01G392400.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, peroxisome
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G432600.1	Wheat	mitochondrion	95.7	96.74
HORVU6Hr1G091130.12	Barley	mitochondrion	91.83	92.62
KXG31361	Sorghum	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	88.39	88.77
Zm00001d018487_P001	Maize	plasma membrane	87.31	88.07
Os02t0817700-02	Rice	extracellular	84.3	87.5
GSMUA_Achr1P15360_001	Banana	mitochondrion	78.28	79.3
GSMUA_AchrUn_...	Banana	mitochondrion	78.49	78.83
Zm00001d049882_P001	Maize	cytosol, peroxisome, plastid	25.81	78.43
TraesCS1A01G143900.2	Wheat	mitochondrion	73.76	74.4
Zm00001d031930_P001	Maize	cytosol	33.98	74.18
GSMUA_Achr3P00300_001	Banana	mitochondrion	40.86	71.97
Zm00001d003312_P001	Maize	mitochondrion, peroxisome, plastid	33.55	62.65
TraesCS2A01G036300.1	Wheat	cytosol, mitochondrion, peroxisome	29.03	33.67
TraesCS5A01G169400.1	Wheat	cytosol, mitochondrion, peroxisome	28.6	33.42
TraesCS3A01G003800.1	Wheat	cytosol	29.89	33.25

Protein Annotations

Gene3D:3.40.47.10	MapMan:5.7.3.2.3	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0016740	GO:GO:0016747	InterPro:IPR016039	PFAM:PF00108	PFAM:PF02803	ScanProsite:PS00098
ScanProsite:PS00099	ScanProsite:PS00737	PANTHER:PTHR43853	PANTHER:PTHR43853:SF4	SUPFAM:SSF53901	TIGRFAMs:TIGR01930
InterPro:Thiolase	InterPro:Thiolase-like	InterPro:Thiolase_AS	InterPro:Thiolase_C	InterPro:Thiolase_CS	InterPro:Thiolase_N
InterPro:Thiolase_acyl_enz_int_AS	EnsemblPlantsGene:TraesCS6A01G392400	EnsemblPlants:TraesCS6A01G392400.2	TIGR:cd00751	SEG:seg	:

Description

No Description!

Coordinates

chr6A:+:606969666..606972866

Molecular Weight (calculated)

48523.4 Da

IEP (calculated)

8.347

GRAVY (calculated)

0.058

Length

465 amino acids

Sequence
(BLAST)

001: MEKAIDRQRV LLAHLLPSAS SQAQLSVRSH LPASACAAGD SAAYQRSSCF GDDVVIVAAY RTPICKAKRG GFKDTYPEDL LTPVLKAVLD KTGINPAQIG
101: DVVVGTVLGP GSQRAIECRT ASLLAGIPET VPVRTVNRQC SSGLQAVADV AAAIKAGFYD IGIGAGLESM SVNSVGWEGQ VNPRVIELQK AQDCLLPMGI
201: TSENVAQRYG VTREEQDKAA VESHARAAAA TASGKFKDEI ISVHTKLIDP KTGEEKKVVI SVDDGIRPGT TLSGLAKLKT VFKKDGTTTA GNSSQVSDGA
301: GAVLLMKRSV AVSKGLPILG VFRSFAAVGV DPAVMGVGPA VAIPAAVKSA GLDIDDIDLF ELNEAFASQF VYCCNKLGLD RSKVNVNGGA IAMGHPLGAT
401: GARCISTLLN EMKRRGRDCR FGVVTMCIGS GMGAAAVFER GDSVDELSNV RHIQSHNFLS KDAAK

Best Arabidopsis Sequence Match ( AT2G33150.1 )
(BLAST)

001: MEKAIERQRV LLEHLRPSSS SSHNYEASLS ASACLAGDSA AYQRTSLYGD DVVIVAAHRT PLCKSKRGNF KDTYPDDLLA PVLRALIEKT NLNPSEVGDI
101: VVGTVLAPGS QRASECRMAA FYAGFPETVA VRTVNRQCSS GLQAVADVAA AIKAGFYDIG IGAGLESMTT NPMAWEGSVN PAVKKFAQAQ NCLLPMGVTS
201: ENVAQRFGVS RQEQDQAAVD SHRKAAAATA AGKFKDEIIP VKTKLVDPKT GDEKPITVSV DDGIRPTTTL ASLGKLKPVF KKDGTTTAGN SSQVSDGAGA
301: VLLMKRSVAM QKGLPVLGVF RTFAAVGVDP AIMGIGPAVA IPAAVKAAGL ELDDIDLFEI NEAFASQFVY CRNKLGLDPE KINVNGGAMA IGHPLGATGA
401: RCVATLLHEM KRRGKDCRFG VVSMCIGTGM GAAAVFERGD GVDELRNARK VEAQGLLSKD AR

Arabidopsis Description

PED1PKT3 [Source:UniProtKB/TrEMBL;Acc:A0A178VRP9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.