Factsheet for GSMUA_Achr1P15360_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
peroxisome 3
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	mitochondrion	91.07	90.28
GSMUA_Achr3P00300_001	Banana	mitochondrion	47.93	83.33
GSMUA_Achr8P12850_001	Banana	cytosol	83.22	83.22
Os02t0817700-02	Rice	extracellular	80.83	82.81
Zm00001d018487_P001	Maize	plasma membrane	82.14	81.78
KXG31361	Sorghum	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	80.39	79.7
TraesCS6B01G432600.1	Wheat	mitochondrion	78.65	78.48
TraesCS6A01G392400.2	Wheat	mitochondrion	79.3	78.28
HORVU6Hr1G091130.12	Barley	mitochondrion	76.25	75.92
GSMUA_Achr11P...	Banana	cytosol	75.82	75.82
Zm00001d049882_P001	Maize	cytosol, peroxisome, plastid	24.84	74.51
Zm00001d031930_P001	Maize	cytosol	31.81	68.54
Zm00001d003312_P001	Maize	mitochondrion, peroxisome, plastid	31.59	58.23
GSMUA_Achr1P16400_001	Banana	mitochondrion	27.89	33.6
GSMUA_Achr1P19180_001	Banana	peroxisome	30.07	33.58
GSMUA_Achr1P09500_001	Banana	cytosol, peroxisome, plastid	29.19	33.42
GSMUA_AchrUn_...	Banana	extracellular	6.1	19.72

Protein Annotations

Gene3D:3.40.47.10	MapMan:5.7.3.2.3	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	EnsemblPlantsGene:GSMUA_Achr1G15360_001	EnsemblPlants:GSMUA_Achr1P15360_001	EnsemblPlants:GSMUA_Achr1T15360_001
InterPro:IPR016039	UniProt:M0S044	PFAM:PF00108	PFAM:PF02803	ScanProsite:PS00098	ScanProsite:PS00099
ScanProsite:PS00737	PANTHER:PTHR43853	PANTHER:PTHR43853:SF4	SUPFAM:SSF53901	TIGRFAMs:TIGR01930	InterPro:Thiolase
InterPro:Thiolase-like	InterPro:Thiolase_AS	InterPro:Thiolase_C	InterPro:Thiolase_CS	InterPro:Thiolase_N	InterPro:Thiolase_acyl_enz_int_AS
UniParc:UPI000296F1DF	SEG:seg	:	:	:	:

Description

3-ketoacyl-CoA thiolase 2, peroxisomal [Source:GMGC_GENE;Acc:GSMUA_Achr1G15360_001]

Coordinates

chr1:+:11553290..11560565

Molecular Weight (calculated)

48375.0 Da

IEP (calculated)

7.986

GRAVY (calculated)

-0.002

Length

459 amino acids

Sequence
(BLAST)

001: MEKAINRQRV LLQHLQPFPS SSSSLVSASV CAAGDSAAYQ RNSSFGDDVV VVAAYRTAIS KSKRGGFKDT YPEELLTAVL KALLDKTNLN PNEVGDIVVG
101: TVLAPGSQRA TECRMAAFYA GFPETVPIRT VNRQCSSGLQ AVADVAASIK AGFYDIGIGA GLESMTANSV AWDGSINPKV NKFQQVQDCL LPMGITSENV
201: AFRYGVTRQE QDQAAVESHR KAAAATAAGK FKEEIVPVIT KIVDPKTGEE KQVTISVDDG IRPETSLSGL AKLRPVFKKD GSTTAGNSSQ VSDGAGAVLL
301: MRRDVAMQKG FPILGVFRSF AAVGVDPAVM GVGPAIAIPA AVKSAGLQIE DVDLFEINEA FASQFVYCRK KLELDPAKVN VNGGAIALGH PLGATGARCV
401: STLLNEMKRR GKDCRFGVIS MCIGSGMGAA AVFERGDAVD GLTNARQIHS HNLLSEDAM

Best Arabidopsis Sequence Match ( AT2G33150.1 )
(BLAST)

001: MEKAIERQRV LLEHLRPSSS SSHNYEASLS ASACLAGDSA AYQRTSLYGD DVVIVAAHRT PLCKSKRGNF KDTYPDDLLA PVLRALIEKT NLNPSEVGDI
101: VVGTVLAPGS QRASECRMAA FYAGFPETVA VRTVNRQCSS GLQAVADVAA AIKAGFYDIG IGAGLESMTT NPMAWEGSVN PAVKKFAQAQ NCLLPMGVTS
201: ENVAQRFGVS RQEQDQAAVD SHRKAAAATA AGKFKDEIIP VKTKLVDPKT GDEKPITVSV DDGIRPTTTL ASLGKLKPVF KKDGTTTAGN SSQVSDGAGA
301: VLLMKRSVAM QKGLPVLGVF RTFAAVGVDP AIMGIGPAVA IPAAVKAAGL ELDDIDLFEI NEAFASQFVY CRNKLGLDPE KINVNGGAMA IGHPLGATGA
401: RCVATLLHEM KRRGKDCRFG VVSMCIGTGM GAAAVFERGD GVDELRNARK VEAQGLLSKD AR

Arabidopsis Description

PED1PKT3 [Source:UniProtKB/TrEMBL;Acc:A0A178VRP9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.