Factsheet for GSMUA_Achr8P12850_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
peroxisome 3
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P15360_001	Banana	mitochondrion	83.22	83.22
GSMUA_AchrUn_...	Banana	mitochondrion	82.57	81.86
Zm00001d014093_P002	Maize	mitochondrion	81.7	81.34
EER94131	Sorghum	mitochondrion	81.7	81.17
GSMUA_Achr11P...	Banana	cytosol	80.61	80.61
Os10t0457600-01	Rice	golgi, plasma membrane	80.83	80.48
TraesCS1A01G143900.2	Wheat	mitochondrion	79.96	79.61
Solyc09g061840.2.1	Tomato	cytosol	79.08	79.61
TraesCS1B01G161300.1	Wheat	golgi	79.52	79.18
TraesCS1D01G142700.1	Wheat	mitochondrion	79.52	79.18
PGSC0003DMT400040876	Potato	cytosol	78.65	79.17
VIT_07s0005g05610.t01	Wine grape	cytosol, mitochondrion, peroxisome, plastid	75.16	77.88
HORVU1Hr1G038330.1	Barley	cytosol	78.43	77.59
KRH49796	Soybean	endoplasmic reticulum	74.07	76.4
KRG89223	Soybean	mitochondrion	73.42	75.73
GSMUA_Achr3P00300_001	Banana	mitochondrion	42.92	74.62
Bra020673.1-P	Field mustard	cytosol	69.5	69.96
CDY33940	Canola	cytosol	69.5	69.96
AT5G48880.2	Thale cress	mitochondrion	69.06	69.37
CDY05657	Canola	cytosol	68.19	67.75
GSMUA_Achr1P16400_001	Banana	mitochondrion	28.32	34.12
GSMUA_Achr1P09500_001	Banana	cytosol, peroxisome, plastid	29.19	33.42
GSMUA_Achr1P19180_001	Banana	peroxisome	29.63	33.09
GSMUA_AchrUn_...	Banana	extracellular	6.32	20.42

Protein Annotations

Gene3D:3.40.47.10	MapMan:5.7.3.2.3	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	EnsemblPlantsGene:GSMUA_Achr8G12850_001	EnsemblPlants:GSMUA_Achr8P12850_001	EnsemblPlants:GSMUA_Achr8T12850_001
InterPro:IPR016039	UniProt:M0TPY8	PFAM:PF00108	PFAM:PF02803	ScanProsite:PS00098	ScanProsite:PS00099
ScanProsite:PS00737	PANTHER:PTHR43853	PANTHER:PTHR43853:SF4	SUPFAM:SSF53901	TIGRFAMs:TIGR01930	InterPro:Thiolase
InterPro:Thiolase-like	InterPro:Thiolase_AS	InterPro:Thiolase_C	InterPro:Thiolase_CS	InterPro:Thiolase_N	InterPro:Thiolase_acyl_enz_int_AS
UniParc:UPI00029694D3	SEG:seg	:	:	:	:

Description

3-ketoacyl-CoA thiolase 2, peroxisomal [Source:GMGC_GENE;Acc:GSMUA_Achr8G12850_001]

Coordinates

chr8:-:9617990..9622247

Molecular Weight (calculated)

48409.5 Da

IEP (calculated)

7.614

GRAVY (calculated)

0.027

Length

459 amino acids

Sequence
(BLAST)

001: MEKAIERQRV LLHHLQPSPP LRSPILSTEV CAAGDSAKYQ RSSCFGDDVV IVAACRTAIC KSKRGGFKDT HPEDLLAPVL KALLDKTQLN PSEVGDIVVG
101: TVLAPGSQRA IECRMAAFYA GFPDTVPLRT VNRQCSSGLQ AVADVAAAIK AGFYDIGIGA GLESMTVNSV GLNGPVNPKA ETFPQARDCL LPMGITSENV
201: ADRYGITRQE QDYAAVESHR RAAAATAAGK FKEEIIPVVT KIVDPKTGEH KRVTISVDDG IRLDTSMSVL AKLKPAFKKD GSTTAGNASQ VSDGAGAVLL
301: MRRDVAMQKG LPILGVFRSF AAVGVEPGVM GIGPAVAIPA AVRAAGLQPD DIDIFEINEA FASQFVYCCK KLELDPEKVN VNGGAIALGH PLGATGARCV
401: STLLNEMKRR GKDCRFGVIS MCIGSGMGAA AVFEHGDVVD QLTNARQVEA NSFLSKDAM

Best Arabidopsis Sequence Match ( AT2G33150.1 )
(BLAST)

001: MEKAIERQRV LLEHLRPSSS SSHNYEASLS ASACLAGDSA AYQRTSLYGD DVVIVAAHRT PLCKSKRGNF KDTYPDDLLA PVLRALIEKT NLNPSEVGDI
101: VVGTVLAPGS QRASECRMAA FYAGFPETVA VRTVNRQCSS GLQAVADVAA AIKAGFYDIG IGAGLESMTT NPMAWEGSVN PAVKKFAQAQ NCLLPMGVTS
201: ENVAQRFGVS RQEQDQAAVD SHRKAAAATA AGKFKDEIIP VKTKLVDPKT GDEKPITVSV DDGIRPTTTL ASLGKLKPVF KKDGTTTAGN SSQVSDGAGA
301: VLLMKRSVAM QKGLPVLGVF RTFAAVGVDP AIMGIGPAVA IPAAVKAAGL ELDDIDLFEI NEAFASQFVY CRNKLGLDPE KINVNGGAMA IGHPLGATGA
401: RCVATLLHEM KRRGKDCRFG VVSMCIGTGM GAAAVFERGD GVDELRNARK VEAQGLLSKD AR

Arabidopsis Description

PED1PKT3 [Source:UniProtKB/TrEMBL;Acc:A0A178VRP9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.