Factsheet for Solyc09g061840.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
peroxisome 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400040876	Potato	cytosol	98.9	98.9
KRH49796	Soybean	endoplasmic reticulum	78.07	80.0
Solyc09g091470.2.1	Tomato	plastid	80.92	79.35
KRG89223	Soybean	mitochondrion	77.41	79.33
GSMUA_Achr8P12850_001	Banana	cytosol	79.61	79.08
VIT_07s0005g05610.t01	Wine grape	cytosol, mitochondrion, peroxisome, plastid	75.44	77.65
TraesCS1D01G142700.1	Wheat	mitochondrion	78.29	77.44
Zm00001d014093_P002	Maize	mitochondrion	78.07	77.22
EER94131	Sorghum	mitochondrion	78.07	77.06
TraesCS1A01G143900.2	Wheat	mitochondrion	77.85	77.01
Os10t0457600-01	Rice	golgi, plasma membrane	77.19	76.36
TraesCS1B01G161300.1	Wheat	golgi	77.19	76.36
HORVU1Hr1G038330.1	Barley	cytosol	76.54	75.22
GSMUA_Achr11P...	Banana	cytosol	74.78	74.29
CDY33940	Canola	cytosol	73.46	73.46
Bra020673.1-P	Field mustard	cytosol	73.25	73.25
AT5G48880.2	Thale cress	mitochondrion	72.37	72.21
CDY05657	Canola	cytosol	72.15	71.21
Solyc07g045350.2.1	Tomato	extracellular, plastid, unclear	30.48	34.41
Solyc04g015100.2.1	Tomato	cytosol, peroxisome, plastid	30.26	33.58
Solyc05g017760.2.1	Tomato	plastid, unclear	28.95	32.43

Protein Annotations

Gene3D:3.40.47.10	MapMan:5.7.3.2.3	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005777	GO:GO:0008150	GO:GO:0008152	GO:GO:0016740
GO:GO:0016746	GO:GO:0016747	InterPro:IPR016039	UniProt:K4CU14	PFAM:PF00108	PFAM:PF02803
ScanProsite:PS00098	ScanProsite:PS00099	ScanProsite:PS00737	PANTHER:PTHR43853	PANTHER:PTHR43853:SF4	SUPFAM:SSF53901
EnsemblPlantsGene:Solyc09g061840.2	EnsemblPlants:Solyc09g061840.2.1	TIGRFAMs:TIGR01930	InterPro:Thiolase	InterPro:Thiolase-like	InterPro:Thiolase_AS
InterPro:Thiolase_C	InterPro:Thiolase_CS	InterPro:Thiolase_N	InterPro:Thiolase_acyl_enz_int_AS	UniParc:UPI000276BD46	SEG:seg

Description

3-ketoacyl-CoA thiolase 5, peroxisomal [Source:Projected from Arabidopsis thaliana (AT5G48880) UniProtKB/Swiss-Prot;Acc:Q570C8]

Coordinates

chr9:-:60455942..60461751

Molecular Weight (calculated)

47874.9 Da

IEP (calculated)

8.254

GRAVY (calculated)

0.112

Length

456 amino acids

Sequence
(BLAST)

001: MEKAIERQRV LLEHLQPIRS SSITPSVCLA GDSSAYHRTS AFGDDVVIVA AYRTAICKAK RGGFKDTLSD DLLAPVLKAV VEKTNLNPSE VGDIVVGTVL
101: APGSIRAMEC RMAAFYAGFP DTVPIRTVNR QCSSGLQAVA DVAAAIKAGF YDIGIGAGLE FMTVDNIGLV VKANPKVDAF AQARDCLLPM GITSENVAQR
201: FGVTRLEQDQ AAVISHQRAA AATASGKFKD EIIPVLTKIV DPQTGNEKPV VISVDDGIRP TTNLTGLAKL KPAFKRDGAT TAGNSSQVSD GAAAVLLMKR
301: SVAMQKGLPI LGVFRSFAAV GVDPAVMGIG PAVAIPAAVK SAGLELNNID LFEINEAFAS QYVYCQKKLN LDPENVNVNG GALALGHPLG ATGARCVATL
401: LHEMKRRGKD CRFGVISMCI GSGMGAAAVF ERGDAVDDLC NARANNNNNF LSKDAK

Best Arabidopsis Sequence Match ( AT2G33150.1 )
(BLAST)

001: MEKAIERQRV LLEHLRPSSS SSHNYEASLS ASACLAGDSA AYQRTSLYGD DVVIVAAHRT PLCKSKRGNF KDTYPDDLLA PVLRALIEKT NLNPSEVGDI
101: VVGTVLAPGS QRASECRMAA FYAGFPETVA VRTVNRQCSS GLQAVADVAA AIKAGFYDIG IGAGLESMTT NPMAWEGSVN PAVKKFAQAQ NCLLPMGVTS
201: ENVAQRFGVS RQEQDQAAVD SHRKAAAATA AGKFKDEIIP VKTKLVDPKT GDEKPITVSV DDGIRPTTTL ASLGKLKPVF KKDGTTTAGN SSQVSDGAGA
301: VLLMKRSVAM QKGLPVLGVF RTFAAVGVDP AIMGIGPAVA IPAAVKAAGL ELDDIDLFEI NEAFASQFVY CRNKLGLDPE KINVNGGAMA IGHPLGATGA
401: RCVATLLHEM KRRGKDCRFG VVSMCIGTGM GAAAVFERGD GVDELRNARK VEAQGLLSKD AR

Arabidopsis Description

PED1PKT3 [Source:UniProtKB/TrEMBL;Acc:A0A178VRP9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.