CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 2
peroxisome 3
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH49796	Soybean	endoplasmic reticulum	97.08	97.08
Solyc09g061840.2.1	Tomato	cytosol	79.33	77.41
PGSC0003DMT400040876	Potato	cytosol	79.1	77.19
VIT_07s0005g05610.t01	Wine grape	cytosol, mitochondrion, peroxisome, plastid	76.63	76.98
TraesCS1D01G142700.1	Wheat	mitochondrion	76.63	73.97
TraesCS1A01G143900.2	Wheat	mitochondrion	76.18	73.54
GSMUA_Achr8P12850_001	Banana	cytosol	75.73	73.42
TraesCS1B01G161300.1	Wheat	golgi	75.73	73.1
EER94131	Sorghum	mitochondrion	75.51	72.73
HORVU1Hr1G038330.1	Barley	cytosol	75.28	72.2
Os10t0457600-01	Rice	golgi, plasma membrane	74.61	72.02
Zm00001d014093_P002	Maize	mitochondrion	74.38	71.8
KRH33469	Soybean	endoplasmic reticulum, nucleus	74.38	71.49
KRG90241	Soybean	nucleus	73.93	71.37
GSMUA_Achr11P...	Banana	cytosol	72.13	69.93
CDY33940	Canola	cytosol	70.34	68.64
Bra020673.1-P	Field mustard	cytosol	70.34	68.64
AT5G48880.2	Thale cress	mitochondrion	69.21	67.4
CDY05657	Canola	cytosol	69.89	67.32
KRH14066	Soybean	endoplasmic reticulum, nucleus	30.34	33.17
KRH74050	Soybean	endoplasmic reticulum	30.11	32.92
KRH51203	Soybean	cytosol, mitochondrion, peroxisome	29.89	32.52
KRH01946	Soybean	nucleus	29.89	32.52

Protein Annotations

Gene3D:3.40.47.10	MapMan:5.7.3.2.3	EntrezGene:547735	EMBL:ACUP02012192	EMBL:AY383736	EnsemblPlantsGene:GLYMA_20G009100
GO:GO:0003674	GO:GO:0003824	GO:GO:0003988	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152
GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	InterPro:IPR016039
ProteinID:KRG89222.1	EnsemblPlants:KRG89223	ProteinID:KRG89223	ProteinID:KRG89223.1	PFAM:PF00108	PFAM:PF02803
PIRSF:PIRSF000429	ScanProsite:PS00098	ScanProsite:PS00099	ScanProsite:PS00737	PANTHER:PTHR43853	PANTHER:PTHR43853:SF4
UniProt:Q6TXD0	SUPFAM:SSF53901	TIGRFAMs:TIGR01930	TMHMM:TMhelix	InterPro:Thiolase	InterPro:Thiolase-like
InterPro:Thiolase_AS	InterPro:Thiolase_C	InterPro:Thiolase_CS	InterPro:Thiolase_N	InterPro:Thiolase_acyl_enz_int_AS	UniParc:UPI00001D8570
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr20:+:810707..816878

Molecular Weight (calculated)

47043.8 Da

IEP (calculated)

8.617

GRAVY (calculated)

0.045

Length

445 amino acids

Sequence
(BLAST)

001: MDKAIQRQRV LLDHLQPISS SSNFSSQTHQ STDLSASLCF AKNSSHGQIG GSDDDVVIVA AYRTAICKAK RGGFKDTLPD DLLATVLKAV IEKTNVNPAE
101: VGDIVVGTVL APGSDRGIEC RMAAFYAGFP ETVPLRTVNR QCSSGLQAVS DVAAYIKAGF YEIGIGAGLE SMTVDRVNRL RNINPKVETF AEARDCLLPM
201: GITSENVAQR YGVTRLEQDQ AAVESHQRAA AATAAGKFKE EIIPVSTKFV DPKTGVEKKI VVSVDDGIRP NTNLVDLAKL KPAFQKDGTT TAGNASQISD
301: GAAAVLLMKR RVAVQKGLPI LGIFRSFAAV GVDPAVMGVG PAVAIPAAVK SVGLELGNID LFEINEAFAS QYVYCLKKLG LDPRKVNVNG GAIALGHPLG
401: VTGARCVATL LNEMKRRGKD CRYGVISMCI GSGMGAAAVF ERGDF

Best Arabidopsis Sequence Match ( AT1G04710.1 )
(BLAST)

001: MEKATERQRI LLRHLQPSSS SDASLSASAC LSKDSAAYQY GDDVVIVAAQ RTALCKAKRG SFKDTFPDEL LASVLRALIE KTNVNPSEVG DIVVGTVLGP
101: GSQRASECRM AAFYAGFPET VPIRTVNRQC SSGLQAVADV AAAIKAGFYD IGIGAGLESM TTNPRGWKGS VNPNVKKFEQ AHNCLLPMGI TSENVAHRFN
201: VSREEQDQAA VDSHRKAASA TASGKFKDEI TPVKTKIVDP KTGDEKPITV SVDDGIRPNT TLSGLAKLKP VFKEDGTTTA GNSSQLSDGA GAVLLMRRNV
301: AMQKGLPILG VFRTFSAVGV DPAIMGVGPA VAIPAAVKAA GLELNDVDLF EINEAFASQF VYCRNKLGLD AEKINVNGGA IAIGHPLGAT GARCVATLLH
401: EMKRRGKDCR FGVVSMCIGS GMGAAAVFER GGGVDELCDV RKV

Arabidopsis Description

KAT1PKT4 [Source:UniProtKB/TrEMBL;Acc:A0A178W7T5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.