CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, cytosol

Predictor Summary:

cytosol 2
peroxisome 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH01946	Soybean	nucleus	97.31	97.31
KRH14066	Soybean	endoplasmic reticulum, nucleus	80.2	80.59
KRH74050	Soybean	endoplasmic reticulum	79.46	79.85
PGSC0003DMT400050843	Potato	cytosol, peroxisome, plastid	79.46	79.08
Solyc04g015100.2.1	Tomato	cytosol, peroxisome, plastid	79.46	79.08
AT5G47720.4	Thale cress	cytosol, peroxisome, plastid	79.22	78.07
VIT_00s0531g00050.t01	Wine grape	peroxisome	82.15	76.36
CDY25950	Canola	cytosol	77.26	76.14
CDY41065	Canola	cytosol, peroxisome, plastid	76.77	75.66
Bra017469.1-P	Field mustard	plastid	76.77	72.69
KRH49796	Soybean	endoplasmic reticulum	33.5	30.79
KRG89223	Soybean	mitochondrion	32.52	29.89
KRG90241	Soybean	nucleus	32.27	28.63
KRH33469	Soybean	endoplasmic reticulum, nucleus	31.54	27.86

Protein Annotations

EntrezGene:100500596	Gene3D:3.40.47.10	MapMan:9.1.1.1	EMBL:ACUP02004730	EnsemblPlantsGene:GLYMA_07G268500	GO:GO:0003674
GO:GO:0003824	GO:GO:0003985	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0006629	GO:GO:0006635	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	UniProt:I1KNL7	InterPro:IPR016039
EnsemblPlants:KRH51203	ProteinID:KRH51203	ProteinID:KRH51203.1	ProteinID:KRH51204.1	PFAM:PF00108	PFAM:PF02803
PIRSF:PIRSF000429	ScanProsite:PS00099	ScanProsite:PS00737	PANTHER:PTHR18919	PANTHER:PTHR18919:SF131	SUPFAM:SSF53901
TIGRFAMs:TIGR01930	InterPro:Thiolase	InterPro:Thiolase-like	InterPro:Thiolase_AS	InterPro:Thiolase_C	InterPro:Thiolase_CS
InterPro:Thiolase_N	UniParc:UPI00023C5D58	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:44170365..44175203

Molecular Weight (calculated)

42311.1 Da

IEP (calculated)

8.043

GRAVY (calculated)

0.198

Length

409 amino acids

Sequence
(BLAST)

001: MSTSAKSRDV CIVGVARTPI GGLLGTLSSL SATELGSIAI KSALERANVD PSLVQEVFFG NVLSANLGQA PARQAALGAG IPTSVICTTI NKVCASGMKA
101: TMLAALTIQF GLNDVVVAGG MESMSNAPKY LAEARKGSRY GHDTIIDGMV KDGLWDVYNN FGMGACAELC ADQHVITRDE QDSYAIRSFE RGISAQNAGH
201: FAWEIVPVEV STGRGRASTI VDKDEGLGKF DAAKLRKLRP SFKEVGGSVT AGNASSISDG AAALVLVSEE KARELGLHVI AKIKGYGDAA KAPELFTTAP
301: SLAIPKAISN AGLDASQIDY YEINEAFSVV ALANQKLLAL NPEKVNVYGG AVSLGHPLGC SGARILVTLL GVLRQKRGKY GVAAICNGGG GASALVLELM
401: PVAVGRSLL

Best Arabidopsis Sequence Match ( AT5G47720.4 )
(BLAST)

001: MAPPVSDDSL QPRDVCVVGV ARTPIGDFLG SLSSLTATRL GSIAIQAALK RAHVDPALVE EVFFGNVLTA NLGQAPARQA ALGAGIPYSV ICTTINKVCA
101: AGMKSVMLAS QSIQLGLNDI VVAGGMESMS NVPKYLPDAR RGSRLGHDTV VDGMMKDGLW DVYNDFGMGV CGEICADQYR ITREEQDAYA IQSFERGIAA
201: QNTQLFAWEI VPVEVSTGRG RPSVVIDKDE GLGKFDAAKL KKLRPSFKED GGSVTAGNAS SISDGAAALV LVSGEKALEL GLHVIAKIRG YADAAQAPEL
301: FTTTPALAIP KAIKRAGLDA SQVDYYEINE AFSVVALANQ KLLGLDPERL NAHGGAVSLG HPLGCSGARI LVTLLGVLRA KKGKYGVASI CNGGGGASAL
401: VLEFMSEKTI GYSAL

Arabidopsis Description

Probable acetyl-CoA acetyltransferase, cytosolic 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIK7]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.