CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY41065	Canola	cytosol, peroxisome, plastid	98.31	98.31
AT5G47720.4	Thale cress	cytosol, peroxisome, plastid	91.33	91.33
KRH01946	Soybean	nucleus	77.35	78.48
Solyc04g015100.2.1	Tomato	cytosol, peroxisome, plastid	76.87	77.62
KRH51203	Soybean	cytosol, mitochondrion, peroxisome	76.14	77.26
PGSC0003DMT400050843	Potato	cytosol, peroxisome, plastid	76.39	77.13
CDY00071	Canola	plastid	73.73	75.93
CDY19963	Canola	plastid	73.73	75.93
CDY48742	Canola	plastid	73.25	75.43
VIT_00s0531g00050.t01	Wine grape	peroxisome	78.07	73.64
CDX86320	Canola	mitochondrion	73.73	72.0
CDX85319	Canola	mitochondrion	73.01	71.29
CDY05693	Canola	cytosol, mitochondrion, peroxisome	43.86	55.66
CDY05692	Canola	cytosol, plastid	28.19	53.42
CDY33940	Canola	cytosol	33.25	30.26
CDY05657	Canola	cytosol	33.01	29.65
CDY15520	Canola	mitochondrion	31.57	29.05
CDY23766	Canola	cytosol	32.29	29.0
CDY37750	Canola	mitochondrion	32.29	29.0
CDX86611	Canola	cytosol	31.33	28.82
CDX79511	Canola	cytosol	32.05	28.79
CDX84701	Canola	cytosol	32.05	28.79
CDY19452	Canola	cytosol	32.05	28.73
CDY17140	Canola	cytosol	31.81	28.57

Protein Annotations

Gene3D:3.40.47.10	MapMan:9.1.1.1	GO:A0A078GHL8	UniProt:A0A078GHL8	EnsemblPlants:CDY25950	ProteinID:CDY25950
ProteinID:CDY25950.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016740
GO:GO:0016746	GO:GO:0016747	EnsemblPlantsGene:GSBRNA2T00033460001	InterPro:IPR016039	PFAM:PF00108	PFAM:PF02803
PIRSF:PIRSF000429	ScanProsite:PS00099	ScanProsite:PS00737	PANTHER:PTHR18919	PANTHER:PTHR18919:SF131	SUPFAM:SSF53901
TIGRFAMs:TIGR01930	InterPro:Thiolase	InterPro:Thiolase-like	InterPro:Thiolase_AS	InterPro:Thiolase_C	InterPro:Thiolase_CS
InterPro:Thiolase_N	UniParc:UPI0004EEB8FD	SEG:seg	:	:	:

Description

BnaC09g20370DBnaC09g20370D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GHL8]

Coordinates

chrLK032183:-:278407..281574

Molecular Weight (calculated)

43049.0 Da

IEP (calculated)

7.271

GRAVY (calculated)

0.203

Length

415 amino acids

Sequence
(BLAST)

001: MASSVSDQSV QPQDVCVVGV ARTPMGDFLG SLSSITAPRL GSIAIEAALK RANVEPALVE EVFFGNVLTA NLGQAPARQA ALGAGIPYSV ICTTVNKVCA
101: AGMKAVMLAA QSIQLGLNDV VVAGGMESMS NVPKYLPNAR RGSRLGHDTV VDGMTKDGLW DVYNDFGMGV CGEICADQYR ITREEQDAYA IQSFERGIAA
201: QNARLFAWEI VPVEVSSGRG KPSVVIDKDD GIGKFDAAKL KKLRPSFKED GGSVTAGNAS SISDGAAALV LVSGKKAIEL GLNVIAKIRG YADAAQAPEL
301: FTTTPALAIP KAIMRAGLDA SQVDYYEINE AFSVVALANQ KLLGLDPARL NAHGGAVALG HPLGCSGARI LVTLLGVLRA KKGKYGVASI CNGGGGASAL
401: VLEFMSEKTI GYSLL

Best Arabidopsis Sequence Match ( AT5G47720.4 )
(BLAST)

001: MAPPVSDDSL QPRDVCVVGV ARTPIGDFLG SLSSLTATRL GSIAIQAALK RAHVDPALVE EVFFGNVLTA NLGQAPARQA ALGAGIPYSV ICTTINKVCA
101: AGMKSVMLAS QSIQLGLNDI VVAGGMESMS NVPKYLPDAR RGSRLGHDTV VDGMMKDGLW DVYNDFGMGV CGEICADQYR ITREEQDAYA IQSFERGIAA
201: QNTQLFAWEI VPVEVSTGRG RPSVVIDKDE GLGKFDAAKL KKLRPSFKED GGSVTAGNAS SISDGAAALV LVSGEKALEL GLHVIAKIRG YADAAQAPEL
301: FTTTPALAIP KAIKRAGLDA SQVDYYEINE AFSVVALANQ KLLGLDPERL NAHGGAVSLG HPLGCSGARI LVTLLGVLRA KKGKYGVASI CNGGGGASAL
401: VLEFMSEKTI GYSAL

Arabidopsis Description

Probable acetyl-CoA acetyltransferase, cytosolic 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIK7]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.