CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, cytosol

Predictor Summary:

cytosol 2
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY48742	Canola	plastid	69.72	56.58
Bra020710.1-P	Field mustard	cytosol, plastid	69.11	56.08
CDY00071	Canola	plastid	68.2	55.34
CDY19963	Canola	plastid	68.2	55.34
AT5G48230.2	Thale cress	cytosol	67.58	54.84
CDX86320	Canola	mitochondrion	68.81	52.94
CDX85319	Canola	mitochondrion	68.2	52.47
Solyc07g045350.2.1	Tomato	extracellular, plastid, unclear	61.77	50.0
PGSC0003DMT400044777	Potato	cytosol	61.77	50.0
KRH74050	Soybean	endoplasmic reticulum	62.08	49.88
KRH14066	Soybean	endoplasmic reticulum, nucleus	61.77	49.63
PGSC0003DMT400028289	Potato	cytosol	60.24	48.76
GSMUA_Achr1P16400_001	Banana	mitochondrion	56.57	48.56
VIT_12s0057g01200.t01	Wine grape	cytosol	61.16	48.19
Solyc05g017760.2.1	Tomato	plastid, unclear	59.94	48.16
Zm00001d047224_P003	Maize	cytosol	53.21	47.67
GSMUA_Achr1P09500_001	Banana	cytosol, peroxisome, plastid	57.49	46.88
Os09t0252100-01	Rice	plastid	56.88	46.38
KXG39211	Sorghum	cytosol, peroxisome, plastid	55.35	45.14
GSMUA_Achr1P19180_001	Banana	peroxisome	56.57	45.01
TraesCS5B01G166200.2	Wheat	cytosol, mitochondrion, peroxisome	54.74	44.97
TraesCS5D01G173800.1	Wheat	cytosol	54.74	44.97
KXG24143	Sorghum	cytosol	55.05	44.89
TraesCS5A01G169400.1	Wheat	cytosol, mitochondrion, peroxisome	54.43	44.72
TraesCS2B01G049200.1	Wheat	golgi	54.43	44.39
TraesCS2A01G036300.1	Wheat	cytosol, mitochondrion, peroxisome	54.43	44.39
Zm00001d031212_P004	Maize	cytosol, peroxisome, plastid	54.43	44.39
TraesCS2D01G035400.2	Wheat	cytosol	54.13	44.14
CDY41065	Canola	cytosol, peroxisome, plastid	55.96	44.1
CDY25950	Canola	cytosol	55.66	43.86
HORVU5Hr1G052090.10	Barley	endoplasmic reticulum, vacuole	55.05	43.8
KXG32103	Sorghum	cytosol	52.91	41.09
Os01t0110400-01	Rice	cytosol	51.99	40.87
Zm00001d029416_P001	Maize	peroxisome	55.05	40.63
TraesCS3A01G003800.1	Wheat	cytosol	51.68	40.43
TraesCS3B01G008700.1	Wheat	cytosol	51.68	40.43
TraesCS3D01G005500.1	Wheat	cytosol	51.68	40.43
Zm00001d008432_P003	Maize	mitochondrion	52.6	37.72
HORVU2Hr1G005420.1	Barley	mitochondrion, peroxisome, plastid	28.13	28.57
HORVU3Hr1G000760.3	Barley	peroxisome	35.78	27.27
CDY33940	Canola	cytosol	30.58	21.93
CDY05657	Canola	cytosol	30.58	21.64
CDY15520	Canola	mitochondrion	29.66	21.51
CDY37750	Canola	mitochondrion	30.28	21.43
CDY23766	Canola	cytosol	30.28	21.43
CDX86611	Canola	cytosol	29.36	21.29
CDX84701	Canola	cytosol	29.97	21.21
CDY17140	Canola	cytosol	29.97	21.21
CDX79511	Canola	cytosol	29.97	21.21
CDY19452	Canola	cytosol	29.97	21.17
CDY05692	Canola	cytosol, plastid	5.2	7.76

Protein Annotations

Gene3D:3.40.47.10	MapMan:9.1.1.1	GO:A0A078F1H8	EnsemblPlants:CDY05693	ProteinID:CDY05693	ProteinID:CDY05693.1
ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016740
GO:GO:0016747	EnsemblPlantsGene:GSBRNA2T00120698001	InterPro:IPR016039	PFAM:PF00108	PFAM:PF02803	ScanProsite:PS00099
ScanProsite:PS00737	PANTHER:PTHR18919	PANTHER:PTHR18919:SF131	SUPFAM:SSF53901	TIGRFAMs:TIGR01930	InterPro:Thiolase
InterPro:Thiolase-like	InterPro:Thiolase_AS	InterPro:Thiolase_C	InterPro:Thiolase_CS	InterPro:Thiolase_N	UniParc:UPI0004EE3CE9
SEG:seg	:	:	:	:	:

Description

BnaC02g38440D

Coordinates

chrLK031963:+:946438..953070

Molecular Weight (calculated)

34585.4 Da

IEP (calculated)

5.337

GRAVY (calculated)

-0.160

Length

327 amino acids

Sequence
(BLAST)

001: MAPGKKAELD ATLENLRDEV NKIGVVERSM EDLKESVMEI RNRMSVMERL EKRLDETEET RKREFASLFQ ATLQSHMEEE ISPPIRRSGK QIASEEEGSG
101: LFRGGTSGDD YAVQSFERGI AAQEAGAFAW EIVPVEVSGG RGRPSTIVDK DEGLGKFDAA KLRKLRPSFK VNGGTVTAGN ASSISDGAAA LVLVSGEKAL
201: KLGLQVIAKV KGYGDAAQEP EFFTTAPALA IPKAIAHAGL ESSQVDYYEI NEAFAVVALA NQKLLGITPE KVNVNGGAVS LGHPLGCSGA RILITLLGIL
301: KNRNGKYGVG GVCNGGGGAS AIVLELV

Best Arabidopsis Sequence Match ( AT5G47720.2 )
(BLAST)

001: MAPPVSDDSL QPRDVCVVGV ARTPIGDFLG SLSSLTATRL GSIAIQAALK RAHVDPALVE EVFFGNVLTA NLGQAPARQA ALGAGIPYSV ICTTINKVCA
101: AGMKSVMLAS QSIQLGLNDI VVAGGMESMS NVPKYLPDAR RGSRLGHDTV VDGMMKDGLW DVYNDFGMGV CGEICADQYR ITREEQDAYA IQSFERGIAA
201: QNTQLFAWEI VPVEVSTGRG RPSVVIDKDE GLGKFDAAKL KKLRPSFKED GGSVTAGNAS SISDGAAALV LVSGEKALEL GLHVIAKIRG YADAAQAPEL
301: FTTTPALAIP KAIKRAGLDA SQVDYYEINE AFSVVALANQ KLLGLDPERL NAHGGAVSLG HPLGCSGARI LVTLLGVLRA KKGKYGVASI CNGGGGASAL
401: VLEFMSEKTI GYSAL

Arabidopsis Description

Probable acetyl-CoA acetyltransferase, cytosolic 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIK7]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.