Factsheet for Os09t0252100-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 2
peroxisome 3
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

plastid: 27992503

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G049200.1	Wheat	golgi	92.52	92.52
TraesCS2D01G035400.2	Wheat	cytosol	92.27	92.27
TraesCS2A01G036300.1	Wheat	cytosol, mitochondrion, peroxisome	92.02	92.02
TraesCS5D01G173800.1	Wheat	cytosol	91.27	91.96
TraesCS5B01G166200.2	Wheat	cytosol, mitochondrion, peroxisome	91.27	91.96
TraesCS5A01G169400.1	Wheat	cytosol, mitochondrion, peroxisome	91.02	91.71
Zm00001d031212_P004	Maize	cytosol, peroxisome, plastid	91.52	91.52
KXG24143	Sorghum	cytosol	91.27	91.27
Zm00001d047224_P003	Maize	cytosol	81.8	89.86
HORVU5Hr1G052090.10	Barley	endoplasmic reticulum, vacuole	91.52	89.29
KXG39211	Sorghum	cytosol, peroxisome, plastid	89.28	89.28
GSMUA_Achr1P09500_001	Banana	cytosol, peroxisome, plastid	84.04	84.04
GSMUA_Achr1P16400_001	Banana	mitochondrion	79.8	83.99
GSMUA_Achr1P19180_001	Banana	peroxisome	84.29	82.24
Zm00001d029416_P001	Maize	peroxisome	90.27	81.72
VIT_12s0057g01200.t01	Wine grape	cytosol	82.79	80.0
KRH14066	Soybean	endoplasmic reticulum, nucleus	80.8	79.61
AT5G48230.2	Thale cress	cytosol	79.55	79.16
KRH74050	Soybean	endoplasmic reticulum	80.3	79.12
Solyc07g045350.2.1	Tomato	extracellular, plastid, unclear	79.55	78.96
CDY00071	Canola	plastid	79.3	78.91
CDY19963	Canola	plastid	79.3	78.91
PGSC0003DMT400044777	Potato	cytosol	79.3	78.71
HORVU2Hr1G005420.1	Barley	mitochondrion, peroxisome, plastid	63.09	78.57
PGSC0003DMT400028289	Potato	cytosol	79.05	78.47
CDY48742	Canola	plastid	78.8	78.41
Bra020710.1-P	Field mustard	cytosol, plastid	78.55	78.16
Solyc05g017760.2.1	Tomato	plastid, unclear	78.55	77.4
Bra037501.1-P	Field mustard	mitochondrion, plastid	78.8	74.35
Os01t0110400-01	Rice	cytosol	77.06	74.28
CDX86320	Canola	mitochondrion	78.3	73.88
CDX85319	Canola	mitochondrion	78.3	73.88
Bra036182.1-P	Field mustard	plastid	79.05	73.55
CDY05692	Canola	cytosol, plastid	31.17	57.08
CDY05693	Canola	cytosol, mitochondrion, peroxisome	46.38	56.88
Os02t0817700-02	Rice	extracellular	32.42	29.02
Os10t0457600-01	Rice	golgi, plasma membrane	33.17	28.85

Protein Annotations

Gene3D:3.40.47.10	EntrezGene:4346520	MapMan:9.1.1.1	EMBL:AK102536	ProteinID:BAD22334.1	ProteinID:BAT07057.1
ProteinID:EAZ43919.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0003985	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006629	GO:GO:0006635	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016740	GO:GO:0016746	GO:GO:0016747
InterPro:IPR016039	EnsemblPlantsGene:Os09g0252100	EnsemblPlants:Os09t0252100-01	PFAM:PF00108	PFAM:PF02803	PIRSF:PIRSF000429
ScanProsite:PS00099	ScanProsite:PS00737	PANTHER:PTHR18919	PANTHER:PTHR18919:SF131	UniProt:Q6K3Z3	SUPFAM:SSF53901
TIGRFAMs:TIGR01930	InterPro:Thiolase	InterPro:Thiolase-like	InterPro:Thiolase_AS	InterPro:Thiolase_C	InterPro:Thiolase_CS
InterPro:Thiolase_N	UniParc:UPI0000377E3F	RefSeq:XP_015651167.1	RefSeq:XP_015651168.1	SEG:seg	:

Description

Similar to Acetyl-CoA C-acetyltransferase. (Os09t0252100-01);Similar to Acetyl-CoA acetyltransferase, cytosolic 1. (Os09t0252100-02)

Coordinates

chr9:+:3970178..3975732

Molecular Weight (calculated)

41026.5 Da

IEP (calculated)

6.516

GRAVY (calculated)

0.210

Length

401 amino acids

Sequence
(BLAST)

001: MASDNIGSRD VCVVGVARTP MGGFLGALSS LSATKLGSIA IEAALKRANV DPALVQEVFF GNVLSANLGQ APARQAALGA GIPNTVVCSA VNKVCASGMK
101: ATMFAAQSIL LGINDIVVAG GMESMSNAPK YIAEARKGSR FGHDTLVDGM LKDGLWDVYG DFAMGNCAEL CADNHALTRE DQDAYAIQSN ERGIAARNSG
201: AFAWEIVPIE VPVGRGKPPV LVDKDEGLDK FDPVKLKKLR PSFKENGGTV TAGNASSISD GAAALVLVSG QKAQELGLQV IARIKGFADA AQAPELFTTS
301: PALAIPKALA NAGLESSRVD YYEINEAFSA VALANQKLLG IPSEKINVHG GAVSLGHPLG CSGARILVTL LGVLREKGGK IGVAGVCNGG GGASALVLEL
401: A

Best Arabidopsis Sequence Match ( AT5G47720.4 )
(BLAST)

001: MAPPVSDDSL QPRDVCVVGV ARTPIGDFLG SLSSLTATRL GSIAIQAALK RAHVDPALVE EVFFGNVLTA NLGQAPARQA ALGAGIPYSV ICTTINKVCA
101: AGMKSVMLAS QSIQLGLNDI VVAGGMESMS NVPKYLPDAR RGSRLGHDTV VDGMMKDGLW DVYNDFGMGV CGEICADQYR ITREEQDAYA IQSFERGIAA
201: QNTQLFAWEI VPVEVSTGRG RPSVVIDKDE GLGKFDAAKL KKLRPSFKED GGSVTAGNAS SISDGAAALV LVSGEKALEL GLHVIAKIRG YADAAQAPEL
301: FTTTPALAIP KAIKRAGLDA SQVDYYEINE AFSVVALANQ KLLGLDPERL NAHGGAVSLG HPLGCSGARI LVTLLGVLRA KKGKYGVASI CNGGGGASAL
401: VLEFMSEKTI GYSAL

Arabidopsis Description

Probable acetyl-CoA acetyltransferase, cytosolic 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIK7]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.