Factsheet for Os02t0817700-02

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 1
peroxisome 3
cytosol 2
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid, secretory
BaCelLo:	plastid
EpiLoc:	peroxisome
MultiLoc:	cytosol
Plant-mPloc:	peroxisome
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	peroxisome

nucleus: 19621931
plastid: 21433289
extracellular: 24083427
extracellular: 26194822
plasma membrane: 27800704
plastid: 27992503

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

msms PMID: 21433289 doi

S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky

Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.

msms PMID: 24083427 doi

T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu

Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.

msms PMID: 19621931 doi

T Aki, S Yanagisawa

Department of Applied Biological Chemistry, The University of Tokyo, Japan.

msms PMID: 26194822 doi

WK Cho, TK Hyun, D Kumar, Y Rim, XY Chen, Y Jo, S Kim, KW Lee, ZY Park, WJ Lucas, JY Kim

Department of Industrial Plant Science and Technology, College of Agricultural, Life and Environmental Sciences, Chungbuk National University, Cheongju 361-763, Korea., Department of Life Science, Gwangju Institute of Science and Technology, Gwangju 500-712, Korea., Department of Plant Biology, University of California, Davis, CA 95616, USA., Division of Applied Life Science (BK21plus), Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju 660-701, Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG31361	Sorghum	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	91.07	88.12
Zm00001d018487_P001	Maize	plasma membrane	90.18	87.64
TraesCS6B01G432600.1	Wheat	mitochondrion	87.72	85.43
TraesCS6A01G392400.2	Wheat	mitochondrion	87.5	84.3
HORVU6Hr1G091130.12	Barley	mitochondrion	84.6	82.21
Zm00001d049882_P001	Maize	cytosol, peroxisome, plastid	27.68	81.05
GSMUA_Achr1P15360_001	Banana	mitochondrion	82.81	80.83
GSMUA_AchrUn_...	Banana	mitochondrion	83.04	80.35
Zm00001d031930_P001	Maize	cytosol	36.38	76.53
GSMUA_Achr3P00300_001	Banana	mitochondrion	44.42	75.38
Os10t0457600-01	Rice	golgi, plasma membrane	76.79	74.62
Zm00001d003312_P001	Maize	mitochondrion, peroxisome, plastid	34.38	61.85
Os01t0110400-01	Rice	cytosol	30.13	32.45
Os09t0252100-01	Rice	plastid	29.02	32.42

Protein Annotations

Gene3D:3.40.47.10	EntrezGene:4331150	MapMan:5.7.3.2.3	EMBL:AY224469	ProteinID:BAD21525.1	ProteinID:BAF10437.1
ProteinID:BAS81589.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016740
GO:GO:0016746	GO:GO:0016747	InterPro:IPR016039	EnsemblPlantsGene:Os02g0817700	EnsemblPlants:Os02t0817700-02	PFAM:PF00108
PFAM:PF02803	PIRSF:PIRSF000429	ScanProsite:PS00098	ScanProsite:PS00099	ScanProsite:PS00737	PANTHER:PTHR43853
PANTHER:PTHR43853:SF4	UniProt:Q84P96	SUPFAM:SSF53901	TIGRFAMs:TIGR01930	InterPro:Thiolase	InterPro:Thiolase-like
InterPro:Thiolase_AS	InterPro:Thiolase_C	InterPro:Thiolase_CS	InterPro:Thiolase_N	InterPro:Thiolase_acyl_enz_int_AS	UniParc:UPI000005F8C6
RefSeq:XP_015625435.1	SEG:seg	:	:	:	:

Description

3-ketoacyl-CoA thiolase, 3-ketoacyl-CoA thiolase-like proteinSimilar to 3-ketoacyl-CoA thiolase (Fragment). (Os02t0817700-02)

Coordinates

chr2:-:35080879..35085196

Molecular Weight (calculated)

46832.2 Da

IEP (calculated)

8.253

GRAVY (calculated)

0.009

Length

448 amino acids

Sequence
(BLAST)

001: MEKAIDRQRV LLAHLLPSSS SDQSLLSASA CAAGDSAAYQ RTSAYGDDVV VVAAYRTPIC KAKRGGFKDT YPEDLLTVVL KAVLDNTKIN PGEIGDIVVG
101: TVLGPGSQRA IECRAAAFYA GVPENVPVRT VNRQCSSGLQ AVADVAAAIK AGFYDIGIGA GLESMSVNAM GWEGQVNPKV NEVQKAQDCL LPMGITSENV
201: AHRYGVTRQE QDQAAAESHR RAAAATAAGK FKDEIVPVPT KIVDPKTGEE KKVVISVDDG IRPGTTASGL AKLKPVFRKD GTTTAGNSSQ VSDGAGAVLL
301: MRRDVAMKKG LPILGVFRSF AAVGVDPAVM GVGPAVAIPA AVKSAGLQIE DIDLFELNEA FASQFVYCCN KLGLDRSKVN VNGGAIALGH PLGATGARCV
401: ATLLNEMKRR GRDCRFGVVT MCIGSGMGAA AVFERGDSVD QFSNVRHH

Best Arabidopsis Sequence Match ( AT2G33150.1 )
(BLAST)

001: MEKAIERQRV LLEHLRPSSS SSHNYEASLS ASACLAGDSA AYQRTSLYGD DVVIVAAHRT PLCKSKRGNF KDTYPDDLLA PVLRALIEKT NLNPSEVGDI
101: VVGTVLAPGS QRASECRMAA FYAGFPETVA VRTVNRQCSS GLQAVADVAA AIKAGFYDIG IGAGLESMTT NPMAWEGSVN PAVKKFAQAQ NCLLPMGVTS
201: ENVAQRFGVS RQEQDQAAVD SHRKAAAATA AGKFKDEIIP VKTKLVDPKT GDEKPITVSV DDGIRPTTTL ASLGKLKPVF KKDGTTTAGN SSQVSDGAGA
301: VLLMKRSVAM QKGLPVLGVF RTFAAVGVDP AIMGIGPAVA IPAAVKAAGL ELDDIDLFEI NEAFASQFVY CRNKLGLDPE KINVNGGAMA IGHPLGATGA
401: RCVATLLHEM KRRGKDCRFG VVSMCIGTGM GAAAVFERGD GVDELRNARK VEAQGLLSKD AR

Arabidopsis Description

PED1PKT3 [Source:UniProtKB/TrEMBL;Acc:A0A178VRP9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.