CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, extracellular, endoplasmic reticulum, vacuole, mitochondrion, plastid, plasma membrane, golgi

Predictor Summary:

plastid 2
peroxisome 3
mitochondrion 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, peroxisome, plastid, secretory
Any Predictor:	mitochondrion, peroxisome, plastid, secretory
BaCelLo:	plastid
EpiLoc:	peroxisome
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	peroxisome
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018487_P001	Maize	plasma membrane	95.68	96.1
Os02t0817700-02	Rice	extracellular	88.12	91.07
TraesCS6B01G432600.1	Wheat	mitochondrion	88.34	88.91
TraesCS6A01G392400.2	Wheat	mitochondrion	88.77	88.39
HORVU6Hr1G091130.12	Barley	mitochondrion	85.75	86.12
Zm00001d049882_P001	Maize	cytosol, peroxisome, plastid	27.86	84.31
GSMUA_Achr1P15360_001	Banana	mitochondrion	79.7	80.39
GSMUA_AchrUn_...	Banana	mitochondrion	80.13	80.13
Zm00001d031930_P001	Maize	cytosol	36.5	79.34
EER94131	Sorghum	mitochondrion	75.59	75.76
GSMUA_Achr3P00300_001	Banana	mitochondrion	42.12	73.86
Zm00001d003312_P001	Maize	mitochondrion, peroxisome, plastid	34.99	65.06
KXG24143	Sorghum	cytosol	29.59	34.16
KXG39211	Sorghum	cytosol, peroxisome, plastid	28.73	33.17
KXG32103	Sorghum	cytosol	29.81	32.78

Protein Annotations

Gene3D:3.40.47.10	MapMan:5.7.3.2.3	UniProt:A0A194YT53	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	InterPro:IPR016039	EnsemblPlants:KXG31361
ProteinID:KXG31361	ProteinID:KXG31361.1	PFAM:PF00108	PFAM:PF02803	ScanProsite:PS00098	ScanProsite:PS00099
ScanProsite:PS00737	PANTHER:PTHR43853	PANTHER:PTHR43853:SF4	EnsemblPlantsGene:SORBI_3004G345800	SUPFAM:SSF53901	TIGRFAMs:TIGR01930
InterPro:Thiolase	InterPro:Thiolase-like	InterPro:Thiolase_AS	InterPro:Thiolase_C	InterPro:Thiolase_CS	InterPro:Thiolase_N
InterPro:Thiolase_acyl_enz_int_AS	UniParc:UPI0001C80C85	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:67566253..67570305

Molecular Weight (calculated)

48168.8 Da

IEP (calculated)

8.542

GRAVY (calculated)

0.023

Length

463 amino acids

Sequence
(BLAST)

001: MEKAIDRQRV LLAHLLPSAS ASASSAQPQL AASACAAGDS AAYQRTSSFG DDVVVVAAYR TPICKAKRGG FKDTYPEDLL TVVLKAVLDN TRINPADIGD
101: IVVGTVLGPG SQRAIECRTA ALFAGFPETV PVRTVNRQCS SGLQAVADVA AAIKAGYYDI GIGAGLESMS INSMGWEGQV NPRITELQKA QDCLLPMGIT
201: SENVAHRYGV TRQEQDQAAA ESHRRAAAAT ASGKFKDEIV PVPTKIVDPK TGEEKKVVIS VDDGVRPGTT ASGLAKLKPV FKKDGTTTAG NSSQVSDGAG
301: AVLLMKRSVA LKKGLPILGV FRSFAAVGVD PAVMGVGPAV AIPAAVKSAG LEIGDIDLFE LNEAFASQFV YCCNKLGLDR SKVNVNGGAI ALGHPLGATG
401: ARCVATLLNE MKRRGRDCRF GVVTMCIGSG MGAAAVFERG DAVDGLSNVR DTQTQNFLSR DAK

Best Arabidopsis Sequence Match ( AT2G33150.1 )
(BLAST)

001: MEKAIERQRV LLEHLRPSSS SSHNYEASLS ASACLAGDSA AYQRTSLYGD DVVIVAAHRT PLCKSKRGNF KDTYPDDLLA PVLRALIEKT NLNPSEVGDI
101: VVGTVLAPGS QRASECRMAA FYAGFPETVA VRTVNRQCSS GLQAVADVAA AIKAGFYDIG IGAGLESMTT NPMAWEGSVN PAVKKFAQAQ NCLLPMGVTS
201: ENVAQRFGVS RQEQDQAAVD SHRKAAAATA AGKFKDEIIP VKTKLVDPKT GDEKPITVSV DDGIRPTTTL ASLGKLKPVF KKDGTTTAGN SSQVSDGAGA
301: VLLMKRSVAM QKGLPVLGVF RTFAAVGVDP AIMGIGPAVA IPAAVKAAGL ELDDIDLFEI NEAFASQFVY CRNKLGLDPE KINVNGGAMA IGHPLGATGA
401: RCVATLLHEM KRRGKDCRFG VVSMCIGTGM GAAAVFERGD GVDELRNARK VEAQGLLSKD AR

Arabidopsis Description

PED1PKT3 [Source:UniProtKB/TrEMBL;Acc:A0A178VRP9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.