CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
peroxisome 3
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d014093_P002	Maize	mitochondrion	96.75	96.96
Os10t0457600-01	Rice	golgi, plasma membrane	90.48	90.67
TraesCS1D01G142700.1	Wheat	mitochondrion	89.18	89.37
TraesCS1B01G161300.1	Wheat	golgi	89.18	89.37
TraesCS1A01G143900.2	Wheat	mitochondrion	88.74	88.94
HORVU1Hr1G038330.1	Barley	cytosol	86.8	86.42
GSMUA_Achr8P12850_001	Banana	cytosol	81.17	81.7
Solyc09g061840.2.1	Tomato	cytosol	77.06	78.07
PGSC0003DMT400040876	Potato	cytosol	76.62	77.63
GSMUA_Achr11P...	Banana	cytosol	76.62	77.12
KRH49796	Soybean	endoplasmic reticulum	74.03	76.85
KXG31361	Sorghum	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	75.76	75.59
KRG89223	Soybean	mitochondrion	72.73	75.51
VIT_07s0005g05610.t01	Wine grape	cytosol, mitochondrion, peroxisome, plastid	72.29	75.39
CDY33940	Canola	cytosol	68.18	69.08
Bra020673.1-P	Field mustard	cytosol	68.18	69.08
AT5G48880.2	Thale cress	mitochondrion	67.32	68.05
CDY05657	Canola	cytosol	67.53	67.53
KXG24143	Sorghum	cytosol	29.22	33.67
KXG32103	Sorghum	cytosol	30.09	33.02
KXG39211	Sorghum	cytosol, peroxisome, plastid	28.57	32.92

Protein Annotations

Gene3D:3.40.47.10	MapMan:5.7.3.2.3	EntrezGene:8059276	UniProt:C5WZG9	EnsemblPlants:EER94131	ProteinID:EER94131
ProteinID:EER94131.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005777	GO:GO:0008150	GO:GO:0008152	GO:GO:0016740	GO:GO:0016746
GO:GO:0016747	InterPro:IPR016039	PFAM:PF00108	PFAM:PF02803	ScanProsite:PS00098	ScanProsite:PS00099
ScanProsite:PS00737	PFscan:PS51257	PANTHER:PTHR43853	PANTHER:PTHR43853:SF4	EnsemblPlantsGene:SORBI_3001G230100	SUPFAM:SSF53901
unigene:Sbi.21328	TIGRFAMs:TIGR01930	InterPro:Thiolase	InterPro:Thiolase-like	InterPro:Thiolase_AS	InterPro:Thiolase_C
InterPro:Thiolase_CS	InterPro:Thiolase_N	InterPro:Thiolase_acyl_enz_int_AS	UniParc:UPI0001A82941	RefSeq:XP_002467133.1	SEG:seg

Description

hypothetical protein

Coordinates

chr1:-:22241298..22245238

Molecular Weight (calculated)

48368.6 Da

IEP (calculated)

7.829

GRAVY (calculated)

0.098

Length

462 amino acids

Sequence
(BLAST)

001: MEKAIDRQRV LLRHLSPAAA AESPAPPAIS ASACAAGDSA AYHRTPAFAD DVVIVAAYRT AICKAKRGGF KDTFAEDLLV PVFKALVDKT KLDPSEVGDI
101: VVGTVLAPGS QRAIECRMAA LYAGFPDTVP LKTVNRQCSS GLQAVADVAT AIKAGLYDIG IAAGLESMTV NKVSLDGQVN PKVELFSQAR DCLLPMGLTS
201: ENVAHRFGIT RLEQDQAAVE SHRKAAAAAA AGKFKEEIVP VHTKIVDPKT GEEKKIVVSA DDGIRPDTSL AVLSKLKPAF SKDGTTTAGN ASQVSDGAGA
301: VLLMRRDVAM KKGLPILGVF RTFAAVGVDP AVMGIGPAVA IPAAVKAAGL QMDDIDLFEI NEAFASQYVY CCKKLELDPA KVNVNGGAMA LGHPLGCTGA
401: RCVSTLLNEM KRRGKDCRFG VISMCIGSGM GAAAVFERGD CVDELTNSRG IPTHNWLSKD AM

Best Arabidopsis Sequence Match ( AT2G33150.1 )
(BLAST)

001: MEKAIERQRV LLEHLRPSSS SSHNYEASLS ASACLAGDSA AYQRTSLYGD DVVIVAAHRT PLCKSKRGNF KDTYPDDLLA PVLRALIEKT NLNPSEVGDI
101: VVGTVLAPGS QRASECRMAA FYAGFPETVA VRTVNRQCSS GLQAVADVAA AIKAGFYDIG IGAGLESMTT NPMAWEGSVN PAVKKFAQAQ NCLLPMGVTS
201: ENVAQRFGVS RQEQDQAAVD SHRKAAAATA AGKFKDEIIP VKTKLVDPKT GDEKPITVSV DDGIRPTTTL ASLGKLKPVF KKDGTTTAGN SSQVSDGAGA
301: VLLMKRSVAM QKGLPVLGVF RTFAAVGVDP AIMGIGPAVA IPAAVKAAGL ELDDIDLFEI NEAFASQFVY CRNKLGLDPE KINVNGGAMA IGHPLGATGA
401: RCVATLLHEM KRRGKDCRFG VVSMCIGTGM GAAAVFERGD GVDELRNARK VEAQGLLSKD AR

Arabidopsis Description

PED1PKT3 [Source:UniProtKB/TrEMBL;Acc:A0A178VRP9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.