Factsheet for GSMUA_Achr11P17120_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
peroxisome 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P12850_001	Banana	cytosol	80.61	80.61
EER94131	Sorghum	mitochondrion	77.12	76.62
Zm00001d014093_P002	Maize	mitochondrion	76.91	76.57
TraesCS1D01G142700.1	Wheat	mitochondrion	76.47	76.14
TraesCS1A01G143900.2	Wheat	mitochondrion	76.25	75.92
GSMUA_Achr1P15360_001	Banana	mitochondrion	75.82	75.82
TraesCS1B01G161300.1	Wheat	golgi	76.03	75.7
Os10t0457600-01	Rice	golgi, plasma membrane	75.82	75.49
VIT_07s0005g05610.t01	Wine grape	cytosol, mitochondrion, peroxisome, plastid	72.33	74.94
HORVU1Hr1G038330.1	Barley	cytosol	75.6	74.78
Solyc09g061840.2.1	Tomato	cytosol	74.29	74.78
GSMUA_AchrUn_...	Banana	mitochondrion	75.38	74.73
PGSC0003DMT400040876	Potato	cytosol	74.07	74.56
KRH49796	Soybean	endoplasmic reticulum	70.59	72.81
KRG89223	Soybean	mitochondrion	69.93	72.13
GSMUA_Achr3P00300_001	Banana	mitochondrion	39.22	68.18
Bra020673.1-P	Field mustard	cytosol	67.32	67.76
CDY33940	Canola	cytosol	67.32	67.76
AT5G48880.2	Thale cress	mitochondrion	67.1	67.4
CDY05657	Canola	cytosol	66.23	65.8
GSMUA_Achr1P16400_001	Banana	mitochondrion	27.23	32.81
GSMUA_Achr1P09500_001	Banana	cytosol, peroxisome, plastid	28.32	32.42
GSMUA_Achr1P19180_001	Banana	peroxisome	28.76	32.12
GSMUA_AchrUn_...	Banana	extracellular	5.66	18.31

Protein Annotations

Gene3D:3.40.47.10	MapMan:5.7.3.2.3	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	EnsemblPlantsGene:GSMUA_Achr11G17120_001	EnsemblPlants:GSMUA_Achr11P17120_001	EnsemblPlants:GSMUA_Achr11T17120_001
InterPro:IPR016039	UniProt:M0RSZ2	PFAM:PF00108	PFAM:PF02803	ScanProsite:PS00098	ScanProsite:PS00099
ScanProsite:PS00737	PANTHER:PTHR43853	PANTHER:PTHR43853:SF4	SUPFAM:SSF53901	TIGRFAMs:TIGR01930	InterPro:Thiolase
InterPro:Thiolase-like	InterPro:Thiolase_AS	InterPro:Thiolase_C	InterPro:Thiolase_CS	InterPro:Thiolase_N	InterPro:Thiolase_acyl_enz_int_AS
UniParc:UPI000296458C	SEG:seg	:	:	:	:

Description

3-ketoacyl-CoA thiolase 2, peroxisomal [Source:GMGC_GENE;Acc:GSMUA_Achr11G17120_001]

Coordinates

chr11:+:18767883..18774825

Molecular Weight (calculated)

48540.7 Da

IEP (calculated)

8.477

GRAVY (calculated)

-0.004

Length

459 amino acids

Sequence
(BLAST)

001: MEKAIERQRI LLHHLRPSPS ADPPSISVPS SNPPLICLGR GKLGAKDRSS CFGDDVVIVA ACRTALCKAR KGGFKDTYPD DLLAPVLKAL LDKTRLNPSE
101: VGDIIVGTVL APGSQRAIEC RMGAFYAGFP DTVPLRTVNR QCSSGLQAVA DIAAAIKAGF YDFGIGAGVE SMTVDPVRWD WPANPNAQLF AQARDCLLPM
201: GITSENVAER YGITRQEQDQ AAVESHRKAA AAVAAGKFKE EIIPVVTKVV DPKTGEHKQV TVSADDGIRP DTSISVLSKL KPAFKKDGTT TAGNSSQVTD
301: GAAAVLLMRR DAAMKKGLPV LGVFRSFVAV GVEPNIMGIG PVAAIPAAVK AAGLELDDID LFEINEAFAS QYVYCCKKLK LDPAKVNVNG GAMALGHPLG
401: CTGARCVSTL LYEMKRRGKD CRFGVISMCI GSGMGAAAVF ERGDGVDQLS NARQVISNN

Best Arabidopsis Sequence Match ( AT2G33150.1 )
(BLAST)

001: MEKAIERQRV LLEHLRPSSS SSHNYEASLS ASACLAGDSA AYQRTSLYGD DVVIVAAHRT PLCKSKRGNF KDTYPDDLLA PVLRALIEKT NLNPSEVGDI
101: VVGTVLAPGS QRASECRMAA FYAGFPETVA VRTVNRQCSS GLQAVADVAA AIKAGFYDIG IGAGLESMTT NPMAWEGSVN PAVKKFAQAQ NCLLPMGVTS
201: ENVAQRFGVS RQEQDQAAVD SHRKAAAATA AGKFKDEIIP VKTKLVDPKT GDEKPITVSV DDGIRPTTTL ASLGKLKPVF KKDGTTTAGN SSQVSDGAGA
301: VLLMKRSVAM QKGLPVLGVF RTFAAVGVDP AIMGIGPAVA IPAAVKAAGL ELDDIDLFEI NEAFASQFVY CRNKLGLDPE KINVNGGAMA IGHPLGATGA
401: RCVATLLHEM KRRGKDCRFG VVSMCIGTGM GAAAVFERGD GVDELRNARK VEAQGLLSKD AR

Arabidopsis Description

PED1PKT3 [Source:UniProtKB/TrEMBL;Acc:A0A178VRP9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.