Factsheet for Os10t0457600-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi

Predictor Summary:

cytosol 2
peroxisome 3
mitochondrion 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane
Any Predictor:	cytosol, mitochondrion, peroxisome, secretory
BaCelLo:	cytosol
EpiLoc:	peroxisome
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	peroxisome
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	peroxisome

nucleus: 19621931
golgi: 25047511
plasma membrane: 27800704
plastid: 27992503

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

msms PMID: 19621931 doi

T Aki, S Yanagisawa

Department of Applied Biological Chemistry, The University of Tokyo, Japan.

msms PMID: 25047511 doi

Y Nie, F Huang, S Dong, L Li, P Gao, H Zhao, Y Wang, S Han

Beijing Key Laboratory of Gene Resource and Molecular Development, Beijing Normal University, College of Life Sciences, Beijing, P. R. China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER94131	Sorghum	mitochondrion	90.67	90.48
Zm00001d014093_P002	Maize	mitochondrion	89.59	89.59
TraesCS1B01G161300.1	Wheat	golgi	88.07	88.07
TraesCS1D01G142700.1	Wheat	mitochondrion	87.64	87.64
TraesCS1A01G143900.2	Wheat	mitochondrion	87.64	87.64
HORVU1Hr1G038330.1	Barley	cytosol	85.9	85.34
GSMUA_Achr8P12850_001	Banana	cytosol	80.48	80.83
PGSC0003DMT400040876	Potato	cytosol	76.36	77.19
Solyc09g061840.2.1	Tomato	cytosol	76.36	77.19
Os02t0817700-02	Rice	extracellular	74.62	76.79
GSMUA_Achr11P...	Banana	cytosol	75.49	75.82
KRH49796	Soybean	endoplasmic reticulum	72.67	75.28
KRG89223	Soybean	mitochondrion	72.02	74.61
VIT_07s0005g05610.t01	Wine grape	cytosol, mitochondrion, peroxisome, plastid	71.58	74.49
Bra020673.1-P	Field mustard	cytosol	66.81	67.54
CDY33940	Canola	cytosol	66.81	67.54
AT5G48880.2	Thale cress	mitochondrion	65.73	66.3
CDY05657	Canola	cytosol	65.73	65.58
Os01t0110400-01	Rice	cytosol	30.37	33.65
Os09t0252100-01	Rice	plastid	28.85	33.17

Protein Annotations

Gene3D:3.40.47.10	EntrezGene:4348804	MapMan:5.7.3.2.3	ProteinID:AAK54299.1	ProteinID:AAP54100.1	EMBL:AK072460
ProteinID:BAF26678.1	ProteinID:BAT11144.1	ProteinID:EAZ16317.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005777	GO:GO:0008150	GO:GO:0008152
GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	InterPro:IPR016039	EnsemblPlantsGene:Os10g0457600	EnsemblPlants:Os10t0457600-01
PFAM:PF00108	PFAM:PF02803	ScanProsite:PS00098	ScanProsite:PS00099	ScanProsite:PS00737	PANTHER:PTHR43853
PANTHER:PTHR43853:SF4	UniProt:Q94LR9	SUPFAM:SSF53901	TIGRFAMs:TIGR01930	InterPro:Thiolase	InterPro:Thiolase-like
InterPro:Thiolase_AS	InterPro:Thiolase_C	InterPro:Thiolase_CS	InterPro:Thiolase_N	InterPro:Thiolase_acyl_enz_int_AS	UniParc:UPI00000A0E70
RefSeq:XP_015614832.1	SEG:seg	:	:	:	:

Description

Similar to Acetyl-CoA C-acyltransferase (3-ketoacyl-coa thiolase b) (EC 2.3.1.16) (Fragment). (Os10t0457600-01)

Coordinates

chr10:+:16775389..16779538

Molecular Weight (calculated)

48028.1 Da

IEP (calculated)

8.203

GRAVY (calculated)

0.112

Length

461 amino acids

Sequence
(BLAST)

001: MEKAINRQRV LLAHLEPAAS PAAAAPAITA SACAAGDSAA YHRGACFADD VVIVAAYRTA ICKSKRGGFK DTPAEDLLVP VFKALIDKTK LNPSEVGDIV
101: VGTVLAPGSQ RAIECRMAAF YAGFPDTVPL MTVNRQCSSG LQAVANVASN IKAGLYDIGI AAGLESMTVN QVRLDGQVNP KVELFSQARD CLLPMGLTSE
201: NVAKRFGITR MEQDQAAVES HRKAAAAAAS GKFKEEIVPV HTKIVDPKTG EEKEIVVSAD DGIRPGTSLA VLSKLKPAFS KDGTTTAGNA SQVSDGAGAV
301: LLMRRDIAMQ KGLPIVGVFR SFAAVGVDPA IMGVGPAVAI PAAVKAAGLQ IDDVDLFEIN EAFASQYVYC CKKLGLDPAK VNVNGGAMAL GHPLGATGAR
401: SVSTLLNEMK RRGKDCRFGV ISMCIGSGMG AAAVFERGDA VDELTNARCI PTHNRLSKDA M

Best Arabidopsis Sequence Match ( AT2G33150.1 )
(BLAST)

001: MEKAIERQRV LLEHLRPSSS SSHNYEASLS ASACLAGDSA AYQRTSLYGD DVVIVAAHRT PLCKSKRGNF KDTYPDDLLA PVLRALIEKT NLNPSEVGDI
101: VVGTVLAPGS QRASECRMAA FYAGFPETVA VRTVNRQCSS GLQAVADVAA AIKAGFYDIG IGAGLESMTT NPMAWEGSVN PAVKKFAQAQ NCLLPMGVTS
201: ENVAQRFGVS RQEQDQAAVD SHRKAAAATA AGKFKDEIIP VKTKLVDPKT GDEKPITVSV DDGIRPTTTL ASLGKLKPVF KKDGTTTAGN SSQVSDGAGA
301: VLLMKRSVAM QKGLPVLGVF RTFAAVGVDP AIMGIGPAVA IPAAVKAAGL ELDDIDLFEI NEAFASQFVY CRNKLGLDPE KINVNGGAMA IGHPLGATGA
401: RCVATLLHEM KRRGKDCRFG VVSMCIGTGM GAAAVFERGD GVDELRNARK VEAQGLLSKD AR

Arabidopsis Description

PED1PKT3 [Source:UniProtKB/TrEMBL;Acc:A0A178VRP9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.