Factsheet for GSMUA_Achr3P00300_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
peroxisome 3
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	mitochondrion	85.98	49.03
GSMUA_Achr1P15360_001	Banana	mitochondrion	83.33	47.93
Os02t0817700-02	Rice	extracellular	75.38	44.42
Zm00001d018487_P001	Maize	plasma membrane	76.52	43.82
GSMUA_Achr8P12850_001	Banana	cytosol	74.62	42.92
KXG31361	Sorghum	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	73.86	42.12
TraesCS6B01G432600.1	Wheat	mitochondrion	72.35	41.52
TraesCS6A01G392400.2	Wheat	mitochondrion	71.97	40.86
GSMUA_Achr11P...	Banana	cytosol	68.18	39.22
HORVU6Hr1G091130.12	Barley	mitochondrion	67.8	38.83
Zm00001d003312_P001	Maize	mitochondrion, peroxisome, plastid	29.55	31.33
Zm00001d031930_P001	Maize	cytosol	12.12	15.02
GSMUA_Achr1P19180_001	Banana	peroxisome	22.73	14.6
GSMUA_Achr1P09500_001	Banana	cytosol, peroxisome, plastid	21.59	14.21
GSMUA_Achr1P16400_001	Banana	mitochondrion	19.7	13.65
Zm00001d049882_P001	Maize	cytosol, peroxisome, plastid	5.68	9.8
GSMUA_AchrUn_...	Banana	extracellular	1.14	2.11

Protein Annotations

EnsemblPlants:GSMUA_Achr3P00300_001	EnsemblPlants:GSMUA_Achr3T00300_001	EnsemblPlantsGene:GSMUA_Achr3G00300_001	Gene3D:3.40.47.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016740	GO:GO:0016747	InterPro:IPR016039	InterPro:Thiolase-like
InterPro:Thiolase_N	InterPro:Thiolase_acyl_enz_int_AS	PANTHER:PTHR43853	PANTHER:PTHR43853:SF4	PFAM:PF00108	ScanProsite:PS00098
SEG:seg	SUPFAM:SSF53901	UniParc:UPI000294BCAE	UniProt:M0SAJ8	MapMan:5.7.3.2.3	:

Description

3-ketoacyl-CoA thiolase 2, peroxisomal [Source:GMGC_GENE;Acc:GSMUA_Achr3G00300_001]

Coordinates

chr3:+:265838..268637

Molecular Weight (calculated)

28211.9 Da

IEP (calculated)

7.340

GRAVY (calculated)

-0.013

Length

264 amino acids

Sequence
(BLAST)

001: MEKAIDRQQV LLQHLRPSPS SAPGGSPLIL ASFCTASDSA AYQRNACFGD DVVVVVAYRT AICKSKRGGF KDTYPEELLT AVLKALLDKT SLNPNEVGYI
101: VVGAVLAPGS QRATEFRMAA FYVGFPETVP VRTVNRQCSS GLQAVADVAA AIKAGFYDIG IGAGLESMTA NMLSWEGSIN PKGNKFQKAQ DCLLPMRIMV
201: ENVAHQFGVA RQEQDQAAVE SHRKAAAATA SGKFKEEIIP VTTKIVDPKT GEEMQVTISV VDGI

Best Arabidopsis Sequence Match ( AT2G33150.1 )
(BLAST)

001: MEKAIERQRV LLEHLRPSSS SSHNYEASLS ASACLAGDSA AYQRTSLYGD DVVIVAAHRT PLCKSKRGNF KDTYPDDLLA PVLRALIEKT NLNPSEVGDI
101: VVGTVLAPGS QRASECRMAA FYAGFPETVA VRTVNRQCSS GLQAVADVAA AIKAGFYDIG IGAGLESMTT NPMAWEGSVN PAVKKFAQAQ NCLLPMGVTS
201: ENVAQRFGVS RQEQDQAAVD SHRKAAAATA AGKFKDEIIP VKTKLVDPKT GDEKPITVSV DDGIRPTTTL ASLGKLKPVF KKDGTTTAGN SSQVSDGAGA
301: VLLMKRSVAM QKGLPVLGVF RTFAAVGVDP AIMGIGPAVA IPAAVKAAGL ELDDIDLFEI NEAFASQFVY CRNKLGLDPE KINVNGGAMA IGHPLGATGA
401: RCVATLLHEM KRRGKDCRFG VVSMCIGTGM GAAAVFERGD GVDELRNARK VEAQGLLSKD AR

Arabidopsis Description

PED1PKT3 [Source:UniProtKB/TrEMBL;Acc:A0A178VRP9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.