CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

cytosol 2
peroxisome 3
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG24143	Sorghum	cytosol	94.26	94.26
TraesCS5A01G169400.1	Wheat	cytosol, mitochondrion, peroxisome	89.28	89.95
TraesCS2B01G049200.1	Wheat	golgi	89.78	89.78
TraesCS5B01G166200.2	Wheat	cytosol, mitochondrion, peroxisome	89.03	89.7
TraesCS2A01G036300.1	Wheat	cytosol, mitochondrion, peroxisome	89.53	89.53
TraesCS2D01G035400.2	Wheat	cytosol	89.28	89.28
Os09t0252100-01	Rice	plastid	89.28	89.28
TraesCS5D01G173800.1	Wheat	cytosol	88.53	89.2
Zm00001d029416_P001	Maize	peroxisome	95.51	86.46
HORVU5Hr1G052090.10	Barley	endoplasmic reticulum, vacuole	88.53	86.37
GSMUA_Achr1P16400_001	Banana	mitochondrion	78.8	82.94
GSMUA_Achr1P09500_001	Banana	cytosol, peroxisome, plastid	82.04	82.04
GSMUA_Achr1P19180_001	Banana	peroxisome	83.54	81.51
AT5G48230.2	Thale cress	cytosol	80.05	79.65
CDY19963	Canola	plastid	79.8	79.4
CDY00071	Canola	plastid	79.8	79.4
CDY48742	Canola	plastid	78.8	78.41
Bra020710.1-P	Field mustard	cytosol, plastid	78.55	78.16
KRH14066	Soybean	endoplasmic reticulum, nucleus	78.8	77.64
HORVU2Hr1G005420.1	Barley	mitochondrion, peroxisome, plastid	62.34	77.64
VIT_12s0057g01200.t01	Wine grape	cytosol	80.3	77.59
PGSC0003DMT400028289	Potato	cytosol	77.81	77.23
KRH74050	Soybean	endoplasmic reticulum	78.3	77.15
Solyc07g045350.2.1	Tomato	extracellular, plastid, unclear	77.06	76.49
Solyc05g017760.2.1	Tomato	plastid, unclear	77.56	76.41
PGSC0003DMT400044777	Potato	cytosol	76.81	76.24
Bra037501.1-P	Field mustard	mitochondrion, plastid	79.8	75.29
KXG32103	Sorghum	cytosol	78.55	74.82
CDX86320	Canola	mitochondrion	78.8	74.35
CDX85319	Canola	mitochondrion	78.8	74.35
Bra036182.1-P	Field mustard	plastid	79.55	74.01
CDY05692	Canola	cytosol, plastid	32.17	58.9
CDY05693	Canola	cytosol, mitochondrion, peroxisome	45.14	55.35
KXG31361	Sorghum	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	33.17	28.73
EER94131	Sorghum	mitochondrion	32.92	28.57

Protein Annotations

Gene3D:3.40.47.10	MapMan:9.1.1.1	UniProt:A0A1B6QMR1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	InterPro:IPR016039	ProteinID:KXG39210.1
EnsemblPlants:KXG39211	ProteinID:KXG39211	ProteinID:KXG39211.1	PFAM:PF00108	PFAM:PF02803	PIRSF:PIRSF000429
ScanProsite:PS00099	ScanProsite:PS00737	PANTHER:PTHR18919	PANTHER:PTHR18919:SF131	EnsemblPlantsGene:SORBI_3001G348100	SUPFAM:SSF53901
TIGRFAMs:TIGR01930	InterPro:Thiolase	InterPro:Thiolase-like	InterPro:Thiolase_AS	InterPro:Thiolase_C	InterPro:Thiolase_CS
InterPro:Thiolase_N	UniParc:UPI0001C80B48	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:63738342..63744492

Molecular Weight (calculated)

41136.6 Da

IEP (calculated)

6.659

GRAVY (calculated)

0.208

Length

401 amino acids

Sequence
(BLAST)

001: MASDGVAPRD VCIVGVARTP MGGFLGALSS FPATKLGSIA IQAALERANV DPALVQEVYF GNVLSANLGQ APARQAALGA GIPNSVVCTT VNKVCASGVK
101: ATMFAAQSIQ LGINNIVVAG GMESMSNAPK YIAEARKGSR FGHDTLVDAM LKDGLWDVYN DCAMGMCAEL CADNHALTRE DQDAFAIQSN ERGIAARDSG
201: AFTWEIVPVQ VPVGRGKPPT LIEKDESLDK FDPVKLKKLR PSFKENGGTV TAGNASSISD GAAALVLVSG QKAQELGLQV LARIKGYADA AQAPELFTTT
301: PALAIPKAIA NAGLESSHVD FYEINEAFSA VALANQKLLG IPSEKINVHG GAVSLGHPLG CSGARILVTL IGVLRAKSGK IGVAGVCNGG GGASALVLEL
401: A

Best Arabidopsis Sequence Match ( AT5G48230.2 )
(BLAST)

001: MAHTSESVNP RDVCIVGVAR TPMGGFLGSL SSLPATKLGS LAIAAALKRA NVDPALVQEV VFGNVLSANL GQAPARQAAL GAGIPNSVIC TTVNKVCASG
101: MKAVMIAAQS IQLGINDVVV AGGMESMSNT PKYLAEARKG SRFGHDSLVD GMLKDGLWDV YNDCGMGSCA ELCAEKFQIT REQQDDYAVQ SFERGIAAQE
201: AGAFTWEIVP VEVSGGRGRP STIVDKDEGL GKFDAAKLRK LRPSFKENGG TVTAGNASSI SDGAAALVLV SGEKALQLGL LVLAKIKGYG DAAQEPEFFT
301: TAPALAIPKA IAHAGLESSQ VDYYEINEAF AVVALANQKL LGIAPEKVNV NGGAVSLGHP LGCSGARILI TLLGILKKRN GKYGVGGVCN GGGGASALVL
401: ELL

Arabidopsis Description

AAT1AT5G48230 protein [Source:UniProtKB/TrEMBL;Acc:B9DGQ1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.