Factsheet for PGSC0003DMT400028289

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
peroxisome 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g017760.2.1	Tomato	plastid, unclear	95.3	94.59
PGSC0003DMT400044777	Potato	cytosol	88.61	88.61
KRH74050	Soybean	endoplasmic reticulum	84.65	84.03
KRH14066	Soybean	endoplasmic reticulum, nucleus	84.65	84.03
AT5G48230.2	Thale cress	cytosol	82.67	82.88
CDY19963	Canola	plastid	82.18	82.38
CDY00071	Canola	plastid	81.93	82.13
CDY48742	Canola	plastid	81.93	82.13
Bra020710.1-P	Field mustard	cytosol, plastid	81.68	81.89
VIT_12s0057g01200.t01	Wine grape	cytosol	83.17	80.96
TraesCS5B01G166200.2	Wheat	cytosol, mitochondrion, peroxisome	78.47	79.65
TraesCS5A01G169400.1	Wheat	cytosol, mitochondrion, peroxisome	78.22	79.4
TraesCS2D01G035400.2	Wheat	cytosol	78.71	79.3
TraesCS2B01G049200.1	Wheat	golgi	78.71	79.3
TraesCS5D01G173800.1	Wheat	cytosol	77.97	79.15
KXG24143	Sorghum	cytosol	78.47	79.05
Os09t0252100-01	Rice	plastid	78.47	79.05
GSMUA_Achr1P16400_001	Banana	mitochondrion	74.5	79.0
Zm00001d031212_P004	Maize	cytosol, peroxisome, plastid	78.22	78.8
TraesCS2A01G036300.1	Wheat	cytosol, mitochondrion, peroxisome	78.22	78.8
GSMUA_Achr1P09500_001	Banana	cytosol, peroxisome, plastid	77.72	78.3
Bra037501.1-P	Field mustard	mitochondrion, plastid	82.18	78.12
CDX86320	Canola	mitochondrion	81.93	77.88
Zm00001d047224_P003	Maize	cytosol	70.3	77.81
KXG39211	Sorghum	cytosol, peroxisome, plastid	77.23	77.81
CDX85319	Canola	mitochondrion	81.44	77.41
PGSC0003DMT400050843	Potato	cytosol, peroxisome, plastid	78.47	77.13
Bra036182.1-P	Field mustard	plastid	82.18	77.03
HORVU5Hr1G052090.10	Barley	endoplasmic reticulum, vacuole	78.22	76.89
GSMUA_Achr1P19180_001	Banana	peroxisome	77.72	76.4
KXG32103	Sorghum	cytosol	74.5	71.5
TraesCS3B01G008700.1	Wheat	cytosol	73.76	71.29
TraesCS3D01G005500.1	Wheat	cytosol	73.76	71.29
TraesCS3A01G003800.1	Wheat	cytosol	73.51	71.05
Os01t0110400-01	Rice	cytosol	72.77	70.67
HORVU2Hr1G005420.1	Barley	mitochondrion, peroxisome, plastid	55.94	70.19
Zm00001d029416_P001	Maize	peroxisome	76.73	69.98
Zm00001d008432_P003	Maize	mitochondrion	74.01	65.57
CDY05693	Canola	cytosol, mitochondrion, peroxisome	48.76	60.24
HORVU3Hr1G000760.3	Barley	peroxisome	60.89	57.34
PGSC0003DMT400076175	Potato	cytosol	34.16	29.68
PGSC0003DMT400040876	Potato	cytosol	32.92	29.17

Protein Annotations

EntrezGene:102601957	Gene3D:3.40.47.10	MapMan:9.1.1.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	InterPro:IPR016039	UniProt:M1AQY2
PFAM:PF00108	PFAM:PF02803	EnsemblPlantsGene:PGSC0003DMG400010900	PGSC:PGSC0003DMG400010900	EnsemblPlants:PGSC0003DMT400028289	PIRSF:PIRSF000429
ScanProsite:PS00099	ScanProsite:PS00737	PANTHER:PTHR18919	PANTHER:PTHR18919:SF131	SUPFAM:SSF53901	TIGRFAMs:TIGR01930
InterPro:Thiolase	InterPro:Thiolase-like	InterPro:Thiolase_AS	InterPro:Thiolase_C	InterPro:Thiolase_CS	InterPro:Thiolase_N
UniParc:UPI000295D986	RefSeq:XP_006353096.1	SEG:seg	:	:	:

Description

Cytosolic acetoacetyl-coenzyme A thiolase [Source:PGSC_GENE;Acc:PGSC0003DMG400010900]

Coordinates

chr5:+:35185235..35191140

Molecular Weight (calculated)

41425.0 Da

IEP (calculated)

6.888

GRAVY (calculated)

0.131

Length

404 amino acids

Sequence
(BLAST)

001: MAPATAESIK PRDVCVVGVA RTPMGGFLGS LSSVSATKLG SIAIAGAIKR ANVDPSLVEE VFFGNVLSAN LGQAPARQAA LGAGLPNTVI CTTVNKVCAS
101: GMKATMLAAQ SIQLGINDVV VAGGMENMSN VPKYFAEARK GSRLGHDSLV DGMLKDGLTD VYNDCGMGVC AEICAENHKI TREDQDNFAV QSFERGIAAQ
201: EAGAFTWEIV PVEVPGGRGK PSTIVDKDEG PGKFDGAKLR KLRPSFKEKD GTVTAGNASS ISDGAAALVL VSGEKAVKLG LDVIAKISGY ADAAQEPELF
301: TISPAKAIPK AIKSAGLEAS QIDYYEINEA FAVVALANQK LLGLNPEKIN VHGGAVSLGH PLGCSGARIL VTLLGVLRQK NGKYGAAGVC NGGGGASALV
401: VELM

Best Arabidopsis Sequence Match ( AT5G48230.2 )
(BLAST)

001: MAHTSESVNP RDVCIVGVAR TPMGGFLGSL SSLPATKLGS LAIAAALKRA NVDPALVQEV VFGNVLSANL GQAPARQAAL GAGIPNSVIC TTVNKVCASG
101: MKAVMIAAQS IQLGINDVVV AGGMESMSNT PKYLAEARKG SRFGHDSLVD GMLKDGLWDV YNDCGMGSCA ELCAEKFQIT REQQDDYAVQ SFERGIAAQE
201: AGAFTWEIVP VEVSGGRGRP STIVDKDEGL GKFDAAKLRK LRPSFKENGG TVTAGNASSI SDGAAALVLV SGEKALQLGL LVLAKIKGYG DAAQEPEFFT
301: TAPALAIPKA IAHAGLESSQ VDYYEINEAF AVVALANQKL LGIAPEKVNV NGGAVSLGHP LGCSGARILI TLLGILKKRN GKYGVGGVCN GGGGASALVL
401: ELL

Arabidopsis Description

AAT1AT5G48230 protein [Source:UniProtKB/TrEMBL;Acc:B9DGQ1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.