Factsheet for TraesCS2B01G049200.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

mitochondrion 2
cytosol 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, peroxisome
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G035400.2	Wheat	cytosol	98.0	98.0
TraesCS2A01G036300.1	Wheat	cytosol, mitochondrion, peroxisome	97.76	97.76
Os09t0252100-01	Rice	plastid	92.52	92.52
TraesCS5B01G166200.2	Wheat	cytosol, mitochondrion, peroxisome	91.77	92.46
Zm00001d031212_P004	Maize	cytosol, peroxisome, plastid	92.02	92.02
KXG24143	Sorghum	cytosol	91.27	91.27
Zm00001d047224_P003	Maize	cytosol	82.04	90.14
KXG39211	Sorghum	cytosol, peroxisome, plastid	89.78	89.78
HORVU2Hr1G005420.1	Barley	mitochondrion, peroxisome, plastid	66.83	83.23
GSMUA_Achr1P16400_001	Banana	mitochondrion	78.55	82.68
GSMUA_Achr1P09500_001	Banana	cytosol, peroxisome, plastid	81.8	81.8
Zm00001d029416_P001	Maize	peroxisome	90.27	81.72
GSMUA_Achr1P19180_001	Banana	peroxisome	82.29	80.29
KRH14066	Soybean	endoplasmic reticulum, nucleus	80.8	79.61
Solyc07g045350.2.1	Tomato	extracellular, plastid, unclear	79.8	79.21
PGSC0003DMT400044777	Potato	cytosol	79.55	78.96
AT5G48230.2	Thale cress	cytosol	79.3	78.91
CDY19963	Canola	plastid	79.3	78.91
KRH74050	Soybean	endoplasmic reticulum	80.05	78.87
VIT_12s0057g01200.t01	Wine grape	cytosol	81.55	78.8
PGSC0003DMT400028289	Potato	cytosol	79.3	78.71
CDY00071	Canola	plastid	79.05	78.66
CDY48742	Canola	plastid	78.3	77.92
Bra020710.1-P	Field mustard	cytosol, plastid	78.3	77.92
Solyc05g017760.2.1	Tomato	plastid, unclear	78.55	77.4
Bra037501.1-P	Field mustard	mitochondrion, plastid	78.8	74.35
CDX85319	Canola	mitochondrion	78.3	73.88
CDX86320	Canola	mitochondrion	78.05	73.65
Bra036182.1-P	Field mustard	plastid	79.05	73.55
TraesCS3B01G008700.1	Wheat	cytosol	75.81	72.73
CDY05692	Canola	cytosol, plastid	32.67	59.82
CDY05693	Canola	cytosol, mitochondrion, peroxisome	44.39	54.43
TraesCS1B01G161300.1	Wheat	golgi	33.42	29.07
TraesCS6B01G432600.1	Wheat	mitochondrion	33.17	28.91

Protein Annotations

Gene3D:3.40.47.10	MapMan:9.1.1.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0016740	GO:GO:0016747	InterPro:IPR016039	PFAM:PF00108	PFAM:PF02803	PIRSF:PIRSF000429
ScanProsite:PS00099	ScanProsite:PS00737	PANTHER:PTHR18919	PANTHER:PTHR18919:SF131	SUPFAM:SSF53901	TIGRFAMs:TIGR01930
InterPro:Thiolase	InterPro:Thiolase-like	InterPro:Thiolase_AS	InterPro:Thiolase_C	InterPro:Thiolase_CS	InterPro:Thiolase_N
EnsemblPlantsGene:TraesCS2B01G049200	EnsemblPlants:TraesCS2B01G049200.1	TIGR:cd00751	SEG:seg	:	:

Description

No Description!

Coordinates

chr2B:+:24238205..24243758

Molecular Weight (calculated)

41034.5 Da

IEP (calculated)

6.154

GRAVY (calculated)

0.192

Length

401 amino acids

Sequence
(BLAST)

001: MGSDNIGPRD VCVVGVARTP MGGFLGALSS LPATKLGSIA IEAALKRANV DPPLVQEVFF GNVLSANLGQ APARQAALGA GIPNTVVCTT VNKVCASGMK
101: ATMFAAQSIQ LGSNDIVVAG GMESMSNAPK YIAEARKGSR FGHDSLVDGM LKDGLWDVYG DCAMGVCAEL CADNHALTRE DQDAFAIQSN ERGIAARDSG
201: AFAWEIVPVE VPVGRGKPPV LVEKDESLDR FDPAKLRKLR PSFKEKAGTV TAGNASSISD GSAALVLVSG QKAQELGLQV LARIKGFADA AQAPELFTTT
301: PALAIPKALS NAGLESSSVD FYEINEAFAA VALANQKILG IPSEKINVHG GAVSLGHPLG CSGARILVTL IGVLREKGGK IGVAGVCNGG GGASALVLEL
401: A

Best Arabidopsis Sequence Match ( AT5G48230.2 )
(BLAST)

001: MAHTSESVNP RDVCIVGVAR TPMGGFLGSL SSLPATKLGS LAIAAALKRA NVDPALVQEV VFGNVLSANL GQAPARQAAL GAGIPNSVIC TTVNKVCASG
101: MKAVMIAAQS IQLGINDVVV AGGMESMSNT PKYLAEARKG SRFGHDSLVD GMLKDGLWDV YNDCGMGSCA ELCAEKFQIT REQQDDYAVQ SFERGIAAQE
201: AGAFTWEIVP VEVSGGRGRP STIVDKDEGL GKFDAAKLRK LRPSFKENGG TVTAGNASSI SDGAAALVLV SGEKALQLGL LVLAKIKGYG DAAQEPEFFT
301: TAPALAIPKA IAHAGLESSQ VDYYEINEAF AVVALANQKL LGIAPEKVNV NGGAVSLGHP LGCSGARILI TLLGILKKRN GKYGVGGVCN GGGGASALVL
401: ELL

Arabidopsis Description

AAT1AT5G48230 protein [Source:UniProtKB/TrEMBL;Acc:B9DGQ1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.