Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra005522.1-P | Field mustard | cytosol | 96.54 | 96.54 |
| CDY17140 | Canola | cytosol | 96.54 | 96.54 |
| CDY19452 | Canola | cytosol | 96.54 | 96.33 |
| CDX84701 | Canola | cytosol | 96.32 | 96.32 |
| Bra022927.1-P | Field mustard | cytosol | 95.89 | 96.3 |
| CDY23766 | Canola | cytosol | 96.1 | 96.1 |
| CDX79511 | Canola | cytosol | 96.1 | 96.1 |
| Bra021829.1-P | Field mustard | cytosol | 95.89 | 95.89 |
| CDY37750 | Canola | mitochondrion | 95.67 | 95.67 |
| AT1G04710.1 | Thale cress | cytosol | 83.98 | 87.58 |
| VIT_05s0051g00720.t01 | Wine grape | cytosol | 87.23 | 87.42 |
| PGSC0003DMT400076175 | Potato | cytosol | 87.01 | 86.45 |
| Solyc09g091470.2.1 | Tomato | plastid | 87.01 | 86.45 |
| KRH33469 | Soybean | endoplasmic reticulum, nucleus | 84.85 | 84.67 |
| KRG90241 | Soybean | nucleus | 84.2 | 84.38 |
| AT5G48880.2 | Thale cress | mitochondrion | 67.53 | 68.27 |
| AT5G48230.2 | Thale cress | cytosol | 30.52 | 34.99 |
| AT5G47720.4 | Thale cress | cytosol, peroxisome, plastid | 27.92 | 31.08 |
Protein Annotations
| PDB:2C7Y | PDB:2C7Z | PDB:2WU9 | Gene3D:3.40.47.10 | MapMan:5.7.3.2.3 | EntrezGene:817876 |
| UniProt:A0A178VRP9 | ProteinID:AAC04908.1 | EMBL:AB008854 | ProteinID:AEC08791.1 | EMBL:AF327529 | EMBL:AF349530 |
| EMBL:AK222103 | ArrayExpress:AT2G33150 | EnsemblPlantsGene:AT2G33150 | RefSeq:AT2G33150 | TAIR:AT2G33150 | RefSeq:AT2G33150-TAIR-G |
| EnsemblPlants:AT2G33150.1 | TAIR:AT2G33150.1 | EMBL:AY052702 | EMBL:AY058176 | EMBL:AY063720 | EMBL:AY087543 |
| ProteinID:BAA25249.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003988 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005730 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005773 |
| GO:GO:0005774 | GO:GO:0005777 | GO:GO:0006629 | GO:GO:0006631 | GO:GO:0006633 | GO:GO:0006635 |
| GO:GO:0006950 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009058 | GO:GO:0009507 | GO:GO:0009514 | GO:GO:0009536 | GO:GO:0009611 | GO:GO:0009695 |
| GO:GO:0009719 | GO:GO:0009789 | GO:GO:0009987 | GO:GO:0010111 | GO:GO:0016020 | GO:GO:0016043 |
| GO:GO:0016740 | GO:GO:0016746 | GO:GO:0016747 | GO:GO:0031408 | InterPro:IPR016039 | RefSeq:NP_180873.1 |
| ProteinID:OAP09130.1 | PFAM:PF00108 | PFAM:PF02803 | Symbol:PKT3 | PO:PO:0000005 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | ScanProsite:PS00098 | ScanProsite:PS00099 | ScanProsite:PS00737 |
| PANTHER:PTHR43853 | PANTHER:PTHR43853:SF4 | UniProt:Q56WD9 | SUPFAM:SSF53901 | TIGRFAMs:TIGR01930 | InterPro:Thiolase |
| InterPro:Thiolase-like | InterPro:Thiolase_AS | InterPro:Thiolase_C | InterPro:Thiolase_CS | InterPro:Thiolase_N | InterPro:Thiolase_acyl_enz_int_AS |
| UniParc:UPI0000035E33 | SEG:seg | : | : | : | : |
Description
PED1PKT3 [Source:UniProtKB/TrEMBL;Acc:A0A178VRP9]
Coordinates
chr2:-:14047478..14051400
Molecular Weight (calculated)
48581.4 Da
IEP (calculated)
8.470
GRAVY (calculated)
-0.048
Length
462 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKAIERQRV LLEHLRPSSS SSHNYEASLS ASACLAGDSA AYQRTSLYGD DVVIVAAHRT PLCKSKRGNF KDTYPDDLLA PVLRALIEKT NLNPSEVGDI
101: VVGTVLAPGS QRASECRMAA FYAGFPETVA VRTVNRQCSS GLQAVADVAA AIKAGFYDIG IGAGLESMTT NPMAWEGSVN PAVKKFAQAQ NCLLPMGVTS
201: ENVAQRFGVS RQEQDQAAVD SHRKAAAATA AGKFKDEIIP VKTKLVDPKT GDEKPITVSV DDGIRPTTTL ASLGKLKPVF KKDGTTTAGN SSQVSDGAGA
301: VLLMKRSVAM QKGLPVLGVF RTFAAVGVDP AIMGIGPAVA IPAAVKAAGL ELDDIDLFEI NEAFASQFVY CRNKLGLDPE KINVNGGAMA IGHPLGATGA
401: RCVATLLHEM KRRGKDCRFG VVSMCIGTGM GAAAVFERGD GVDELRNARK VEAQGLLSKD AR
101: VVGTVLAPGS QRASECRMAA FYAGFPETVA VRTVNRQCSS GLQAVADVAA AIKAGFYDIG IGAGLESMTT NPMAWEGSVN PAVKKFAQAQ NCLLPMGVTS
201: ENVAQRFGVS RQEQDQAAVD SHRKAAAATA AGKFKDEIIP VKTKLVDPKT GDEKPITVSV DDGIRPTTTL ASLGKLKPVF KKDGTTTAGN SSQVSDGAGA
301: VLLMKRSVAM QKGLPVLGVF RTFAAVGVDP AIMGIGPAVA IPAAVKAAGL ELDDIDLFEI NEAFASQFVY CRNKLGLDPE KINVNGGAMA IGHPLGATGA
401: RCVATLLHEM KRRGKDCRFG VVSMCIGTGM GAAAVFERGD GVDELRNARK VEAQGLLSKD AR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.