Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 2
- peroxisome 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024408.1-P | Field mustard | plastid | 78.38 | 79.38 |
| CDY08765 | Canola | plastid | 78.24 | 79.24 |
| CDY45614 | Canola | plastid | 78.38 | 78.93 |
| CDY52535 | Canola | plastid | 78.1 | 78.87 |
| Bra031849.1-P | Field mustard | plastid | 77.68 | 78.67 |
| CDY37838 | Canola | plastid | 53.97 | 77.4 |
| VIT_07s0205g00030.t01 | Wine grape | nucleus | 43.51 | 47.56 |
| KRH74431 | Soybean | mitochondrion | 44.49 | 46.91 |
| KRH39527 | Soybean | extracellular, golgi | 34.73 | 46.03 |
| AT2G22680.1 | Thale cress | cytosol, peroxisome, plastid | 43.51 | 45.68 |
| PGSC0003DMT400078676 | Potato | plastid | 44.63 | 45.01 |
| Solyc02g091710.2.1 | Tomato | plastid | 44.77 | 44.71 |
| KRH45468 | Soybean | cytosol, peroxisome | 25.1 | 44.66 |
| AT4G37890.1 | Thale cress | nucleus | 45.19 | 43.84 |
| KRH75634 | Soybean | nucleus | 36.12 | 39.97 |
| AT5G49665.1 | Thale cress | plastid | 37.94 | 36.76 |
| Os04t0101800-01 | Rice | cytosol, mitochondrion, peroxisome, plastid | 34.17 | 35.56 |
| GSMUA_Achr5P14740_001 | Banana | mitochondrion | 33.89 | 35.12 |
| GSMUA_Achr4P20870_001 | Banana | cytosol, mitochondrion, nucleus, peroxisome | 35.43 | 34.7 |
| GSMUA_Achr7P01890_001 | Banana | mitochondrion | 34.03 | 34.17 |
| Zm00001d024940_P001 | Maize | peroxisome | 35.01 | 34.06 |
| TraesCS2A01G045100.1 | Wheat | peroxisome | 35.84 | 33.82 |
| GSMUA_Achr4P22090_001 | Banana | nucleus | 33.47 | 33.57 |
| TraesCS2B01G057300.1 | Wheat | peroxisome | 35.7 | 33.25 |
| TraesCS2D01G043700.1 | Wheat | peroxisome | 35.29 | 33.16 |
| Zm00001d004553_P001 | Maize | peroxisome | 34.59 | 33.07 |
| KRH45469 | Soybean | nucleus | 7.67 | 31.07 |
| OQU81040 | Sorghum | peroxisome | 30.54 | 30.63 |
| AT5G60710.1 | Thale cress | extracellular, mitochondrion, plastid | 26.22 | 26.7 |
| AT1G08050.1 | Thale cress | plastid | 22.73 | 25.43 |
| AT3G54780.4 | Thale cress | endoplasmic reticulum, extracellular, plastid | 22.45 | 23.61 |
| AT2G38970.1 | Thale cress | mitochondrion | 22.73 | 23.55 |
Protein Annotations
| MapMan:26.3.1.6 | Gene3D:3.30.40.10 | Gene3D:3.40.50.410 | EntrezGene:836695 | ProteinID:AED98086.1 | EMBL:AK117780 |
| EMBL:AK228549 | ArrayExpress:AT5G65683 | EnsemblPlantsGene:AT5G65683 | RefSeq:AT5G65683 | TAIR:AT5G65683 | RefSeq:AT5G65683-TAIR-G |
| EnsemblPlants:AT5G65683.1 | TAIR:AT5G65683.1 | ProteinID:BAB10674.1 | EMBL:BT005960 | ProteinID:CAA16691.1 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009605 | GO:GO:0009606 |
| GO:GO:0009628 | GO:GO:0009630 | GO:GO:0016740 | GO:GO:0046872 | GO:GO:0048364 | InterPro:IPR001841 |
| InterPro:IPR002035 | InterPro:IPR013083 | InterPro:IPR036465 | RefSeq:NP_680467.1 | PFAM:PF00092 | PFAM:PF17123 |
| PO:PO:0000293 | PFscan:PS50089 | PFscan:PS50234 | PANTHER:PTHR10579 | PANTHER:PTHR10579:SF59 | UniProt:Q0WQX9 |
| SMART:SM00184 | SMART:SM00327 | SUPFAM:SSF53300 | SUPFAM:SSF57850 | UniParc:UPI000016293E | InterPro:VWF_A |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | SEG:seg | InterPro:vWFA_dom_sf | : | : |
Description
WAVH2Probable E3 ubiquitin-protein ligase WAVH2 [Source:UniProtKB/Swiss-Prot;Acc:Q0WQX9]
Coordinates
chr5:+:26261136..26264170
Molecular Weight (calculated)
78583.4 Da
IEP (calculated)
10.191
GRAVY (calculated)
-0.415
Length
717 amino acids
Sequence
(BLAST)
(BLAST)
001: MVFGWRKAFC TSVSSNQDKP QQHSSLHTTD PPIPTPRFRS KFGFLSNPST PRLRSRGGSG TGCRSSASTS VTIPSLPTSP KLHCRTTSNA TPRTSNSSSP
101: KFFSNPSSPK SSSSSSSQGG GGVSLLRATL LLNKSNSSRC AICLQRVNSN QSNSTAAIFT AECSHSFHLS CVNGLEDKRC PFCSAAWNHA PKSNYPAVNN
201: NFGSDPIRRP EIREIKTGKS LRVYNDDEPL AYSPVSLAQI NTIHESDEND DVEDDDDFPG FFRDSSITSD MVPSISGNLE VKLLPESAVV ETGKKKETHV
301: VIMKLKASPS PSSITDAIKA RRPSIDLVTV LDLSNGGANL QTVKHAMRSV ISLLREMDRL SIVVFSTGSK RLMPLRRMTA KGRRSARRMV DALGGMETTG
401: GVGMSVNDAL KKAVKVVEDR REKNPSTSIF VLSDGQDQPE AVLKAKLNAT RIPFVVSTTR FSRPEIPVHS VYIASPGALL HAPLRDAFTE RIASLLNVTL
501: HNVKLNLSLV NGSHLTEISS VYSLTGRLEN FGSGSVIQVG DLFAEEEREF LVELKVPTSS SGSHQVMSVQ SSIVDQMTHQ PMTCPKEKRF LIPRPQSVRY
601: VSSSIERLRN LHSMCRAVAD SRRLIEREDL SGAYQVLTTA RSNASHSDDS LRSLEVELNE LSRIKPRNSI LNRTEDKPEQ LTPTSAWRAA EKLAKVAIMR
701: KHLNRVSDMH GLENARF
101: KFFSNPSSPK SSSSSSSQGG GGVSLLRATL LLNKSNSSRC AICLQRVNSN QSNSTAAIFT AECSHSFHLS CVNGLEDKRC PFCSAAWNHA PKSNYPAVNN
201: NFGSDPIRRP EIREIKTGKS LRVYNDDEPL AYSPVSLAQI NTIHESDEND DVEDDDDFPG FFRDSSITSD MVPSISGNLE VKLLPESAVV ETGKKKETHV
301: VIMKLKASPS PSSITDAIKA RRPSIDLVTV LDLSNGGANL QTVKHAMRSV ISLLREMDRL SIVVFSTGSK RLMPLRRMTA KGRRSARRMV DALGGMETTG
401: GVGMSVNDAL KKAVKVVEDR REKNPSTSIF VLSDGQDQPE AVLKAKLNAT RIPFVVSTTR FSRPEIPVHS VYIASPGALL HAPLRDAFTE RIASLLNVTL
501: HNVKLNLSLV NGSHLTEISS VYSLTGRLEN FGSGSVIQVG DLFAEEEREF LVELKVPTSS SGSHQVMSVQ SSIVDQMTHQ PMTCPKEKRF LIPRPQSVRY
601: VSSSIERLRN LHSMCRAVAD SRRLIEREDL SGAYQVLTTA RSNASHSDDS LRSLEVELNE LSRIKPRNSI LNRTEDKPEQ LTPTSAWRAA EKLAKVAIMR
701: KHLNRVSDMH GLENARF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.