Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra030218.1-P | Field mustard | nucleus | 78.18 | 79.46 |
| CDY25618 | Canola | nucleus, peroxisome, plastid | 77.01 | 79.46 |
| CDX89500 | Canola | cytosol, peroxisome, plastid | 78.04 | 79.2 |
| AT4G37890.1 | Thale cress | nucleus | 67.06 | 61.98 |
| KRH74431 | Soybean | mitochondrion | 48.46 | 48.68 |
| VIT_07s0205g00030.t01 | Wine grape | nucleus | 45.68 | 47.56 |
| KRH39527 | Soybean | extracellular, golgi | 37.04 | 46.77 |
| PGSC0003DMT400078676 | Potato | plastid | 48.46 | 46.55 |
| KRH45468 | Soybean | cytosol, peroxisome | 27.23 | 46.15 |
| Solyc02g091710.2.1 | Tomato | plastid | 48.46 | 46.1 |
| AT5G65683.1 | Thale cress | peroxisome, plastid | 45.68 | 43.51 |
| KRH75634 | Soybean | nucleus | 40.7 | 42.9 |
| AT5G49665.1 | Thale cress | plastid | 42.75 | 39.46 |
| Os04t0101800-01 | Rice | cytosol, mitochondrion, peroxisome, plastid | 37.63 | 37.3 |
| GSMUA_Achr5P14740_001 | Banana | mitochondrion | 37.19 | 36.71 |
| GSMUA_Achr4P20870_001 | Banana | cytosol, mitochondrion, nucleus, peroxisome | 39.09 | 36.48 |
| Zm00001d024940_P001 | Maize | peroxisome | 39.09 | 36.23 |
| GSMUA_Achr7P01890_001 | Banana | mitochondrion | 37.34 | 35.71 |
| TraesCS2A01G045100.1 | Wheat | peroxisome | 39.68 | 35.66 |
| KRH45469 | Soybean | nucleus | 9.22 | 35.59 |
| TraesCS2D01G043700.1 | Wheat | peroxisome | 39.53 | 35.39 |
| Zm00001d004553_P001 | Maize | peroxisome | 38.8 | 35.33 |
| GSMUA_Achr4P22090_001 | Banana | nucleus | 36.75 | 35.1 |
| TraesCS2B01G057300.1 | Wheat | peroxisome | 39.53 | 35.06 |
| OQU81040 | Sorghum | peroxisome | 34.26 | 32.73 |
| AT5G60710.1 | Thale cress | extracellular, mitochondrion, plastid | 26.06 | 25.28 |
| AT1G08050.1 | Thale cress | plastid | 23.72 | 25.27 |
| AT2G38970.1 | Thale cress | mitochondrion | 23.87 | 23.55 |
| AT3G54780.4 | Thale cress | endoplasmic reticulum, extracellular, plastid | 23.43 | 23.46 |
Protein Annotations
| MapMan:26.3.1.6 | Gene3D:3.30.40.10 | Gene3D:3.40.50.410 | EntrezGene:816799 | ProteinID:AAD15576.1 | ProteinID:AAZ14056.1 |
| ProteinID:AEC07340.1 | ArrayExpress:AT2G22680 | EnsemblPlantsGene:AT2G22680 | RefSeq:AT2G22680 | TAIR:AT2G22680 | RefSeq:AT2G22680-TAIR-G |
| EnsemblPlants:AT2G22680.1 | TAIR:AT2G22680.1 | EMBL:AY091112 | EMBL:AY142578 | Unigene:At.39404 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0006464 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009605 | GO:GO:0009606 | GO:GO:0009628 | GO:GO:0009630 | GO:GO:0009987 | GO:GO:0016567 |
| GO:GO:0016740 | GO:GO:0019538 | GO:GO:0046872 | GO:GO:0048364 | GO:GO:0061630 | InterPro:IPR001841 |
| InterPro:IPR002035 | InterPro:IPR013083 | InterPro:IPR036465 | RefSeq:NP_179853.1 | PFAM:PF13519 | PFAM:PF17123 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 | PO:PO:0020100 |
| PO:PO:0025022 | PFscan:PS50089 | PFscan:PS50234 | PANTHER:PTHR10579 | PANTHER:PTHR10579:SF59 | UniProt:Q9ZQ46 |
| SMART:SM00184 | SMART:SM00327 | SUPFAM:SSF53300 | SUPFAM:SSF57850 | UniParc:UPI00000AC476 | InterPro:VWF_A |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | SEG:seg | InterPro:vWFA_dom_sf | : | : |
Description
WAVH1E3 ubiquitin-protein ligase WAVH1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQ46]
Coordinates
chr2:+:9645270..9647655
Molecular Weight (calculated)
74404.8 Da
IEP (calculated)
10.397
GRAVY (calculated)
-0.293
Length
683 amino acids
Sequence
(BLAST)
(BLAST)
001: MLNGWRRAFC TSIPKETNQN DVDDDGLVGL RHKSTSRFGF FSTPSTPRSD SGTGTYSLRC RTSTATAVST TSSLPGTPKL KCKTTTTGET TPRNRSLVSL
101: LTPSSSSISP ASFTLLKSKL RFKQSSSNKC GICLQSVKSG QGTAIFTAEC SHTFHFPCVT SRAAANHNRL ASCPVCGSSL LPEIRNYAKP ESQIKPEIKN
201: KSLRVYNDDE ALISSPISPA GFHTILESDE NEDCEEFTGF SVNTPSPLTA KLLTDRNVDV KLSPESAIVA SGKGYETYSV VMKVKSPPFP TARGFARRVP
301: VDLVAVLDVS GRNSGGKLEM LKQTMRIVLS NLREMDRLSI IAFSSSSKRL SPLRRMTANG RRSARRIVDI ITVPGSVSGV GIDFSGEGMS VNDALKKAVK
401: VLDDRRQKNP FTAVFVLTDR QAHQVAQLAH SRIPIHTIWL SHAIPEDAFA RTINGYLSLS VQDLGLQLGI VSGLGQGEIT SVYSLSGRPA WLGTGSIRLG
501: DMYAEEERAL LVEIKSPVNN SLTGSRSHKI MTVRSRYVDP TTQELRNPED RALLIPTPLT VRSSSNPNIS RLRNLHVSTR AVAESRRLIE RNHYSGAHRL
601: LTSARALLVQ HGLSSSDACI RGLDAEIADL NSVKGRHVAA SESLESLTPT SAWKAAERLA KVAMVRKHMN RVSDLHGFEN ARF
101: LTPSSSSISP ASFTLLKSKL RFKQSSSNKC GICLQSVKSG QGTAIFTAEC SHTFHFPCVT SRAAANHNRL ASCPVCGSSL LPEIRNYAKP ESQIKPEIKN
201: KSLRVYNDDE ALISSPISPA GFHTILESDE NEDCEEFTGF SVNTPSPLTA KLLTDRNVDV KLSPESAIVA SGKGYETYSV VMKVKSPPFP TARGFARRVP
301: VDLVAVLDVS GRNSGGKLEM LKQTMRIVLS NLREMDRLSI IAFSSSSKRL SPLRRMTANG RRSARRIVDI ITVPGSVSGV GIDFSGEGMS VNDALKKAVK
401: VLDDRRQKNP FTAVFVLTDR QAHQVAQLAH SRIPIHTIWL SHAIPEDAFA RTINGYLSLS VQDLGLQLGI VSGLGQGEIT SVYSLSGRPA WLGTGSIRLG
501: DMYAEEERAL LVEIKSPVNN SLTGSRSHKI MTVRSRYVDP TTQELRNPED RALLIPTPLT VRSSSNPNIS RLRNLHVSTR AVAESRRLIE RNHYSGAHRL
601: LTSARALLVQ HGLSSSDACI RGLDAEIADL NSVKGRHVAA SESLESLTPT SAWKAAERLA KVAMVRKHMN RVSDLHGFEN ARF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.