Factsheet for GSMUA_Achr6P19560_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr3P22500_001
GSMUA_Achr4P20870_001
GSMUA_Achr4P22090_001
GSMUA_Achr5P14740_001
GSMUA_Achr5P26130_001
GSMUA_Achr6P06320_001
GSMUA_Achr6P19560_001
GSMUA_Achr7P01890_001
GSMUA_Achr7P03170_001
GSMUA_Achr7P11350_001
GSMUA_Achr8P07910_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G01480.1	GSMUA_Achr3P22500_001	AT1G01050.1	21798944
AT4G01480.1	GSMUA_Achr5P26130_001	AT1G01050.1	21798944
AT4G01480.1	GSMUA_Achr6P19560_001	AT1G01050.1	21798944
AT4G01480.1	GSMUA_Achr7P03170_001	AT1G01050.1	21798944
AT4G01480.1	GSMUA_Achr8P07910_001	AT1G01050.1	21798944
AT4G01480.1	GSMUA_Achr6P06320_001	AT2G32840.1	21798944
AT4G01480.1	GSMUA_Achr7P11350_001	AT2G32840.1	21798944
AT4G01480.1	GSMUA_Achr4P20870_001	AT5G65683.1	21798944
AT4G01480.1	GSMUA_Achr4P22090_001	AT5G65683.1	21798944
AT4G01480.1	GSMUA_Achr5P14740_001	AT5G65683.1	21798944
AT4G01480.1	GSMUA_Achr7P01890_001	AT5G65683.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P03170_001	Banana	cytosol	92.45	92.45
GSMUA_Achr3P22500_001	Banana	cytosol	89.15	89.15
PGSC0003DMT400015012	Potato	cytosol	80.19	89.01
GSMUA_Achr8P07910_001	Banana	cytosol	88.68	88.68
TraesCS2D01G587100.1	Wheat	cytosol	87.74	88.15
Bra032616.1-P	Field mustard	cytosol	83.96	87.68
Solyc08g083370.2.1	Tomato	cytosol	84.43	87.32
Os04t0687100-01	Rice	cytosol, plasma membrane	86.79	86.39
KRH47754	Soybean	cytosol	86.32	86.32
TraesCS2A01G576400.1	Wheat	golgi	87.74	86.11
KXG27493	Sorghum	cytosol	86.79	85.98
Solyc08g013680.2.1	Tomato	cytosol	44.81	85.59
Zm00001d026680_P003	Maize	cytosol	86.32	85.51
PGSC0003DMT400012843	Potato	extracellular	84.91	85.31
AT1G01050.1	Thale cress	cytosol	84.91	84.91
TraesCS2B01G611000.2	Wheat	cytosol	86.79	84.79
Bra033292.1-P	Field mustard	cytosol	84.43	84.43
KRH68981	Soybean	cytosol	83.96	84.36
Bra008551.1-P	Field mustard	cytosol	84.91	84.11
Solyc12g055830.1.1	Tomato	extracellular	84.43	84.04
Os01t0866500-01	Rice	cytosol	83.96	83.96
Os05t0438500-01	Rice	cytosol	88.68	83.93
KRG97263	Soybean	cytosol	83.49	83.89
AT2G46860.1	Thale cress	cytosol	85.38	83.8
Bra037416.1-P	Field mustard	cytosol	83.96	83.18
Zm00001d010171_P002	Maize	cytosol, extracellular	87.74	83.04
Bra040479.1-P	Field mustard	cytosol	84.43	82.87
TraesCS1D01G273500.1	Wheat	cytosol	83.49	81.94
TraesCS1B01G283300.1	Wheat	cytosol	83.49	81.94
TraesCS1A01G273500.1	Wheat	cytosol	83.49	81.94
AT4G01480.1	Thale cress	cytosol	83.02	81.48
EES18298	Sorghum	cytosol	87.26	80.79
PGSC0003DMT400031865	Potato	cytosol	80.66	80.66
GSMUA_Achr6P15350_001	Banana	unclear	81.6	80.47
VIT_02s0025g02980.t01	Wine grape	cytosol	80.66	79.91
OQU87920	Sorghum	cytosol	61.79	79.39
GSMUA_Achr10P...	Banana	cytosol	80.19	79.07
KRH06335	Soybean	cytosol	81.6	77.58
KRG98973	Soybean	cytosol	71.7	77.55
TraesCS3B01G077900.2	Wheat	plastid	87.26	77.41
CDY69447	Canola	cytosol	27.83	74.68
Zm00001d002889_P002	Maize	cytosol	86.79	72.73
HORVU1Hr1G075110.1	Barley	plastid	78.77	71.98
KRG88877	Soybean	cytosol	37.74	69.57
GSMUA_Achr3P17710_001	Banana	cytosol, extracellular	54.72	67.44
KRH72403	Soybean	cytosol	42.92	67.41
KRG99305	Soybean	cytosol	60.38	63.68
GSMUA_Achr5P26130_001	Banana	plastid	86.79	63.23
Os01t0322300-00	Rice	cytosol	20.75	59.46
GSMUA_Achr5P23650_001	Banana	extracellular	77.36	54.49
HORVU6Hr1G058900.2	Barley	cytosol	39.62	46.67
HORVU2Hr1G065020.1	Barley	cytosol	26.42	40.58
GSMUA_Achr6P30130_001	Banana	cytosol	21.23	24.73
GSMUA_Achr9P26260_001	Banana	cytosol	21.23	24.73

Protein Annotations

KEGG:00190+3.6.1.1	Gene3D:3.90.80.10	MapMan:35.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0004427	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006796	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr6G19560_001
EnsemblPlants:GSMUA_Achr6P19560_001	EnsemblPlants:GSMUA_Achr6T19560_001	InterPro:IPR036649	UniProt:M0T8F4	HAMAP:MF_00209	PFAM:PF00719
ScanProsite:PS00387	PANTHER:PTHR10286	PANTHER:PTHR10286:SF10	InterPro:Pyrophosphatase	InterPro:Pyrophosphatase_sf	SUPFAM:SSF50324
UniParc:UPI000296970B	:	:	:	:	:

Description

Soluble inorganic pyrophosphatase [Source:GMGC_GENE;Acc:GSMUA_Achr6G19560_001]

Coordinates

chr6:-:13847013..13848703

Molecular Weight (calculated)

24314.2 Da

IEP (calculated)

6.046

GRAVY (calculated)

-0.422

Length

212 amino acids

Sequence
(BLAST)

001: MSKENGTAST ERRPVPRLNE RILSSLSKRS VAAHPWHDLE IGPEAPAVFN VVVEITKGSK VKYELDKKTG LIKVDRILYS SVVYPHNYGF IPRTLCEDND
101: PMDVLVLMQE PVIPGCFLRA RAIGLMPMID QGEKDDKIIA VCADDPEYRH YNDLSELPPH RLAEIRRFFE DYKKNENKEV AVNEFLSTTA AREAIQYSMD
201: LYAEYILQSL RR

Best Arabidopsis Sequence Match ( AT1G01050.2 )
(BLAST)

001: MSEETKDNQR LQRPAPRLNE RILSSLSRRS VAAHPWHDLE IGPGAPQIFN VVVEITKGSK VKYELDKKTG LIKVDRILYS SVVYPHNYGF VPRTLCEDND
101: PIDVLVIMQE PVLPGCFLRA RAIGLMPMID QGEKDDKIIA VCVDDPEYKH YTDIKELPPH RLSEIRRFFE DYKKNENKEV AVNDFLPSES AVEAIQYSMD
201: LYAEYILHTL RR

Arabidopsis Description

PPA1Soluble inorganic pyrophosphatase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q93V56]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.