Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY69447 | Canola | cytosol | 34.06 | 59.49 |
| HORVU6Hr1G058900.2 | Barley | cytosol | 75.36 | 57.78 |
| KRG88877 | Soybean | cytosol | 34.78 | 41.74 |
| KRH72403 | Soybean | cytosol | 39.13 | 40.0 |
| HORVU1Hr1G075110.1 | Barley | plastid | 49.28 | 29.31 |
| TraesCS1D01G273500.1 | Wheat | cytosol | 45.65 | 29.17 |
| TraesCS1B01G283300.1 | Wheat | cytosol | 45.65 | 29.17 |
| TraesCS1A01G273500.1 | Wheat | cytosol | 45.65 | 29.17 |
| PGSC0003DMT400015012 | Potato | cytosol | 39.13 | 28.27 |
| Zm00001d010171_P002 | Maize | cytosol, extracellular | 44.2 | 27.23 |
| GSMUA_Achr3P22500_001 | Banana | cytosol | 41.3 | 26.89 |
| KRG97263 | Soybean | cytosol | 40.58 | 26.54 |
| GSMUA_Achr6P19560_001 | Banana | cytosol | 40.58 | 26.42 |
| GSMUA_Achr7P03170_001 | Banana | cytosol | 40.58 | 26.42 |
| Solyc08g083370.2.1 | Tomato | cytosol | 39.13 | 26.34 |
| EES18298 | Sorghum | cytosol | 43.48 | 26.2 |
| KRH68981 | Soybean | cytosol | 39.86 | 26.07 |
| GSMUA_Achr8P07910_001 | Banana | cytosol | 39.86 | 25.94 |
| KRH47754 | Soybean | cytosol | 39.86 | 25.94 |
| AT2G46860.1 | Thale cress | cytosol | 40.58 | 25.93 |
| Bra040479.1-P | Field mustard | cytosol | 40.58 | 25.93 |
| Os05t0438500-01 | Rice | cytosol | 42.03 | 25.89 |
| Solyc12g055830.1.1 | Tomato | extracellular | 39.86 | 25.82 |
| Bra032616.1-P | Field mustard | cytosol | 37.68 | 25.62 |
| PGSC0003DMT400012843 | Potato | extracellular | 39.13 | 25.59 |
| AT1G01050.1 | Thale cress | cytosol | 39.13 | 25.47 |
| Bra033292.1-P | Field mustard | cytosol | 39.13 | 25.47 |
| PGSC0003DMT400031865 | Potato | cytosol | 39.13 | 25.47 |
| Bra037416.1-P | Field mustard | cytosol | 39.13 | 25.23 |
| KRG98973 | Soybean | cytosol | 35.51 | 25.0 |
| KRH06335 | Soybean | cytosol | 39.86 | 24.66 |
| Bra008551.1-P | Field mustard | cytosol | 37.68 | 24.3 |
| AT4G01480.1 | Thale cress | cytosol | 36.96 | 23.61 |
| VIT_02s0025g02980.t01 | Wine grape | cytosol | 35.51 | 22.9 |
| KRG99305 | Soybean | cytosol | 33.33 | 22.89 |
| HORVU3Hr1G116580.1 | Barley | cytosol | 37.68 | 22.61 |
| HORVU6Hr1G068760.1 | Barley | cytosol | 33.33 | 21.5 |
| HORVU1Hr1G075660.1 | Barley | cytosol | 34.78 | 21.15 |
| HORVU1Hr1G005920.4 | Barley | cytosol, plastid | 34.78 | 20.08 |
| GSMUA_Achr5P26130_001 | Banana | plastid | 39.86 | 18.9 |
| HORVU3Hr1G116650.3 | Barley | cytosol, endoplasmic reticulum | 36.96 | 15.99 |
| HORVU7Hr1G085380.2 | Barley | plastid | 10.87 | 11.63 |
| HORVU6Hr1G080160.1 | Barley | plastid | 15.22 | 7.32 |
| Solyc08g013680.2.1 | Tomato | cytosol | 1.45 | 1.8 |
Protein Annotations
| KEGG:00190+3.6.1.1 | Gene3D:3.90.80.10 | MapMan:35.2 | UniProt:A0A287I8C4 | GO:GO:0000287 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004427 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006796 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 |
| EnsemblPlantsGene:HORVU2Hr1G065020 | EnsemblPlants:HORVU2Hr1G065020.1 | InterPro:IPR036649 | PANTHER:PTHR10286 | PANTHER:PTHR10286:SF10 | InterPro:Pyrophosphatase |
| InterPro:Pyrophosphatase_sf | SUPFAM:SSF50324 | UniParc:UPI000B47A313 | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr2H:+:443837284..443842653
Molecular Weight (calculated)
14732.5 Da
IEP (calculated)
10.825
GRAVY (calculated)
-0.491
Length
138 amino acids
Sequence
(BLAST)
(BLAST)
001: MSQFSGAKGQ AAGEKEAAEP KRQKPPLRKR ILSSLSRRSG TAHPWHDLEI GPRAPAVFNV VMEITKGSKF KYELDKKIVI VSVRLTGSSI PPWCTLTTTD
101: LSHAPSARTT IPSTSSSSCR NQSSPAPYSG PGPSASSL
101: LSHAPSARTT IPSTSSSSCR NQSSPAPYSG PGPSASSL
001: MSEEAYEETQ ESSQSPRPVP KLNERILSTL SRRSVAAHPW HDLEIGPEAP LVFNVVVEIT KGSKVKYELD KKTGLIKVDR ILYSSVVYPH NYGFIPRTLC
101: EDNDPLDVLV LMQEPVLPGC FLRARAIGLM PMIDQGEKDD KIIAVCADDP EYKHFTDIKQ LAPHRLQEIR RFFEDYKKNE NKKVAVNDFL PSESAHEAIQ
201: YSMDLYAEYI LHTLRR
101: EDNDPLDVLV LMQEPVLPGC FLRARAIGLM PMIDQGEKDD KIIAVCADDP EYKHFTDIKQ LAPHRLQEIR RFFEDYKKNE NKKVAVNDFL PSESAHEAIQ
201: YSMDLYAEYI LHTLRR
Arabidopsis Description
PPA3PPa3 [Source:UniProtKB/TrEMBL;Acc:A0A178VZ15]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.