Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G234100.1 | Wheat | plastid | 79.8 | 82.76 |
| TraesCS4B01G232900.1 | Wheat | plastid | 79.54 | 82.06 |
| TraesCS4A01G076800.1 | Wheat | plastid | 78.52 | 81.65 |
| Os03t0234600-00 | Rice | plastid | 42.97 | 63.4 |
| EER92590 | Sorghum | plastid | 45.27 | 57.28 |
| Zm00001d047985_P002 | Maize | plastid | 44.5 | 47.67 |
| GSMUA_Achr7P11350_001 | Banana | endoplasmic reticulum, extracellular | 18.67 | 42.2 |
| GSMUA_Achr6P06320_001 | Banana | nucleus | 10.49 | 38.32 |
| VIT_13s0156g00270.t01 | Wine grape | cytosol | 11.0 | 33.86 |
| KRH43426 | Soybean | cytosol | 21.74 | 31.37 |
| KRH13875 | Soybean | cytosol, nucleus, plastid | 22.25 | 30.21 |
| CDY12159 | Canola | nucleus, plastid | 20.97 | 27.61 |
| Bra005553.1-P | Field mustard | nucleus, plastid | 20.2 | 26.42 |
| Solyc01g073920.2.1 | Tomato | cytosol, plastid | 22.25 | 25.44 |
| CDY18271 | Canola | plastid | 19.18 | 25.25 |
| CDX89775 | Canola | plastid | 21.48 | 24.85 |
| Bra015366.1-P | Field mustard | nucleus, plastid | 21.48 | 24.85 |
| CDY52552 | Canola | nucleus, plastid | 18.67 | 24.83 |
| AT2G32840.1 | Thale cress | nucleus, plastid | 19.95 | 23.15 |
| AT1G04930.2 | Thale cress | nucleus, plastid | 19.69 | 21.27 |
| PGSC0003DMT400016192 | Potato | nucleus, plastid | 12.53 | 17.13 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G064990.1 | EnsemblPlantsGene:HORVU4Hr1G064990 | GO:GO:0005575 | GO:GO:0007049 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0017053 | InterPro:LIN37 | PANTHER:PTHR37173 | PFAM:PF15306 | SEG:seg | UniParc:UPI000B484784 |
| UniProt:A0A287PDN1 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chrchr4H:+:543291171..543302195
Molecular Weight (calculated)
41150.9 Da
IEP (calculated)
10.992
GRAVY (calculated)
-0.547
Length
391 amino acids
Sequence
(BLAST)
(BLAST)
001: RSQFFKAETR NPTKPPVSRS SRVSAMSSPP QPQRPPTATA PPTATPPPPA TAPSQPLPRA AXXXXXXXXX AANPTPTPTP LFTGRPLNPN PSHASPAHGI
101: LYPVATSSSI PATAAAVAAN HRRAPHVGVV YPRPHAVAVP TAPPSQRPQA TTQQRSYAAA PRAVVAGVTP RPEHPPRGVP IAPHPQLKVN AVRAVTPSLA
201: VTPSLVVTPS PAVTPSPAFT PFPQEHVNTK ERESTKENAT TVVINDRKVN VLDSESGSLY ALCRSWLRNG VPHEIQPSFV GNVAPLLPRP LPASVVDSRM
301: SEKDNDVEDQ VSEEEQRYAQ ERNTLCIREV MDRALTNNDT ITTASDLLSE HVTRAKKIRA QLRKERQVRI ERYKQRLALL LPPPPPPPSE P
101: LYPVATSSSI PATAAAVAAN HRRAPHVGVV YPRPHAVAVP TAPPSQRPQA TTQQRSYAAA PRAVVAGVTP RPEHPPRGVP IAPHPQLKVN AVRAVTPSLA
201: VTPSLVVTPS PAVTPSPAFT PFPQEHVNTK ERESTKENAT TVVINDRKVN VLDSESGSLY ALCRSWLRNG VPHEIQPSFV GNVAPLLPRP LPASVVDSRM
301: SEKDNDVEDQ VSEEEQRYAQ ERNTLCIREV MDRALTNNDT ITTASDLLSE HVTRAKKIRA QLRKERQVRI ERYKQRLALL LPPPPPPPSE P
001: MSTPDPNPNP NPNPSVSVAV STPIVTASES PVTQPNTVIT PSSQPQPQTP ASSYRAIAPL HRHHPHQNIY TNPLPIRRSN SVTNSPHQPP HPDPSSLIYP
101: FGSSGRGFPT RPVRQNSNSV ADPVGSPSPG GYTPRGPVYG YHHGQFVSNL DPMNQFMRAA HPQNQQSPQL GSGHMKGVPH FLQPRATPSP TSILDNSGHK
201: KARSRDDALV LVRKRKVRIT EGASLYSLCR SWLRNGAHEG IKPQRIDMMT CLPKPLPVDK TETSLPKDLV EEAICEEDKE DEESVKHLSE SDLLKRHIDR
301: AKKVRARLRE ERLKRIARYK ARLALLLPPF GEQCRNE
101: FGSSGRGFPT RPVRQNSNSV ADPVGSPSPG GYTPRGPVYG YHHGQFVSNL DPMNQFMRAA HPQNQQSPQL GSGHMKGVPH FLQPRATPSP TSILDNSGHK
201: KARSRDDALV LVRKRKVRIT EGASLYSLCR SWLRNGAHEG IKPQRIDMMT CLPKPLPVDK TETSLPKDLV EEAICEEDKE DEESVKHLSE SDLLKRHIDR
301: AKKVRARLRE ERLKRIARYK ARLALLLPPF GEQCRNE
Arabidopsis Description
Proline-rich family protein [Source:UniProtKB/TrEMBL;Acc:Q8GYK6]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.