Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- extracellular 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G434200.2 | Wheat | nucleus | 79.93 | 89.64 |
| TraesCS1A01G425200.2 | Wheat | nucleus | 78.45 | 87.42 |
| TraesCS1B01G459600.2 | Wheat | plastid | 76.05 | 84.86 |
| Os05t0586400-01 | Rice | nucleus | 51.31 | 57.69 |
| KXG22639 | Sorghum | nucleus | 50.4 | 55.81 |
| Zm00001d009716_P001 | Maize | nucleus | 45.04 | 51.7 |
| HORVU3Hr1G055550.3 | Barley | nucleus | 41.05 | 45.4 |
| Bra037384.1-P | Field mustard | nucleus | 10.83 | 41.48 |
| CDX79176 | Canola | cytosol | 4.79 | 37.17 |
| CDY15177 | Canola | nucleus | 17.67 | 27.83 |
| CDY48504 | Canola | nucleus | 17.79 | 27.71 |
| CDX90032 | Canola | nucleus | 17.67 | 27.68 |
| Bra033264.1-P | Field mustard | nucleus | 17.67 | 26.68 |
| CDX91876 | Canola | nucleus | 17.67 | 26.54 |
| CDY67475 | Canola | nucleus | 17.45 | 25.89 |
| GSMUA_Achr3P25070_001 | Banana | vacuole | 20.3 | 25.72 |
| CDY07174 | Canola | nucleus | 18.59 | 25.63 |
| CDY42041 | Canola | cytosol | 18.81 | 25.54 |
| Bra000943.1-P | Field mustard | nucleus | 17.45 | 25.5 |
| CDX80013 | Canola | nucleus | 19.16 | 25.26 |
| CDX71720 | Canola | cytosol | 20.98 | 24.86 |
| VIT_02s0025g01190.t01 | Wine grape | nucleus | 24.06 | 24.85 |
| Bra007625.1-P | Field mustard | cytosol | 20.87 | 24.7 |
| Bra004541.1-P | Field mustard | nucleus | 18.81 | 24.59 |
| CDY11374 | Canola | cytosol | 20.52 | 24.29 |
| VIT_15s0046g01270.t01 | Wine grape | nucleus | 21.44 | 24.07 |
| AT3G61670.1 | Thale cress | nucleus | 21.55 | 23.92 |
| CDY11373 | Canola | cytosol | 19.61 | 23.47 |
| AT2G46380.1 | Thale cress | nucleus | 20.18 | 23.05 |
| AT4G01090.1 | Thale cress | nucleus | 18.47 | 22.69 |
| AT1G01440.1 | Thale cress | nucleus | 17.1 | 22.59 |
| HORVU0Hr1G021800.1 | Barley | nucleus | 20.64 | 22.21 |
| HORVU7Hr1G082720.10 | Barley | cytosol, nucleus | 21.44 | 22.01 |
| KRH06502 | Soybean | nucleus | 21.66 | 21.3 |
| KRG97141 | Soybean | nucleus | 22.12 | 21.3 |
| KRH47938 | Soybean | nucleus | 21.66 | 21.25 |
| KRH68892 | Soybean | nucleus | 21.78 | 21.13 |
| KRG99688 | Soybean | cytosol | 1.48 | 19.12 |
| Solyc01g095590.2.1 | Tomato | nucleus | 20.98 | 19.03 |
| Solyc08g082040.2.1 | Tomato | nucleus | 20.41 | 18.94 |
| PGSC0003DMT400032053 | Potato | nucleus | 20.41 | 18.92 |
| PGSC0003DMT400000290 | Potato | nucleus | 20.75 | 18.13 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G092980.14 | EnsemblPlantsGene:HORVU1Hr1G092980 | InterPro:Zinc_ribbon_12 | PANTHER:PTHR31105 | PANTHER:PTHR31105:SF8 | PFAM:PF11331 |
| SEG:seg | SignalP:SignalP-noTM | UniParc:UPI000B48359E | UniProt:A0A287GRR2 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chrchr1H:-:551854840..551859914
Molecular Weight (calculated)
96197.1 Da
IEP (calculated)
8.885
GRAVY (calculated)
-0.861
Length
877 amino acids
Sequence
(BLAST)
(BLAST)
001: GALPLAPLLV FLAAATPPPH CHADAALPRQ CRPASSSSSP PPSSDGEPEA PPPRTPRRCL CTTAERRHEL SDCASRFLEP LLRFLIPRKG GRGGSGAMGS
101: EPKEMKYRRR VRAPEPGDYG QCGDRGGGAV DWAALKQQDP AELLRKLDEL RDQITRSCEA AGPPPHRMGR RAVPMRPSHA DPLPPPPGRG APPEYYRPSR
201: HAGRYGPPSS YDQRSVCDDR YARQPSGRFR QPRPEGQWEG HGYGGQGSGH HSSCQCPQCV HGQRAVPPQE ESIPMARFFA GQQRPPYQFD RSASSISSEY
301: DRRSVASSLY SQHLSISKRR VEYFSKKADS FCRPAKGGAP FVVCSSCNQL LQLPPGKCTA PKQNQVQCGS CSEVVTFIKL KGVKVHPVIP SSSFSVPKSV
401: RSSDRRAPQS SGWYPYQDDD TSSFDSYRQK QNFSDNLSQS SIGSYGSSTN KEHGPNKSSQ VKPVSVSKSR FADSPKDILC QGDADSHVEA SLIRTICPQA
501: PVLEDKLVDP FSSQQNDCSG GDQIKSKRYG LNSKGNFDVR GERIDVKCEE KRNGKQKDGS GEETRKKTYG QKYLKQLNAS CPTSHIGNKS MRKANSDDSS
601: SLEDEVTSKK YEEKSKQDSN NFEVQGINKR YGNCDKEGYN NDLEFDSITK TCEEESIEDD YSKSVSSNCE NAKTVAKNES SVSERTNTSS HVSSDAGLDE
701: IQSSAGKSGD SSFFGGFLKK GFKDLSLFNQ SMDSVKVSIN GHPISERALR KAEKKAGPVS PGSYWYDQRA GFWGVMGHEC SGIIPPFIKE FSYSMPKNCA
801: GGNTGVLVNG RELHQKDFDL LVKRGLQRFS EKSYTVDISG NVIDAATGDK LRSLGKLAPT IEKMKRGFGM HVPEEIS
101: EPKEMKYRRR VRAPEPGDYG QCGDRGGGAV DWAALKQQDP AELLRKLDEL RDQITRSCEA AGPPPHRMGR RAVPMRPSHA DPLPPPPGRG APPEYYRPSR
201: HAGRYGPPSS YDQRSVCDDR YARQPSGRFR QPRPEGQWEG HGYGGQGSGH HSSCQCPQCV HGQRAVPPQE ESIPMARFFA GQQRPPYQFD RSASSISSEY
301: DRRSVASSLY SQHLSISKRR VEYFSKKADS FCRPAKGGAP FVVCSSCNQL LQLPPGKCTA PKQNQVQCGS CSEVVTFIKL KGVKVHPVIP SSSFSVPKSV
401: RSSDRRAPQS SGWYPYQDDD TSSFDSYRQK QNFSDNLSQS SIGSYGSSTN KEHGPNKSSQ VKPVSVSKSR FADSPKDILC QGDADSHVEA SLIRTICPQA
501: PVLEDKLVDP FSSQQNDCSG GDQIKSKRYG LNSKGNFDVR GERIDVKCEE KRNGKQKDGS GEETRKKTYG QKYLKQLNAS CPTSHIGNKS MRKANSDDSS
601: SLEDEVTSKK YEEKSKQDSN NFEVQGINKR YGNCDKEGYN NDLEFDSITK TCEEESIEDD YSKSVSSNCE NAKTVAKNES SVSERTNTSS HVSSDAGLDE
701: IQSSAGKSGD SSFFGGFLKK GFKDLSLFNQ SMDSVKVSIN GHPISERALR KAEKKAGPVS PGSYWYDQRA GFWGVMGHEC SGIIPPFIKE FSYSMPKNCA
801: GGNTGVLVNG RELHQKDFDL LVKRGLQRFS EKSYTVDISG NVIDAATGDK LRSLGKLAPT IEKMKRGFGM HVPEEIS
001: MAESSTIEAR LVRCPKCKNL LQEPKDCPFF QCGGCGTVLC AKNKDREADL LSVKSVENRS KEIEVTSGSS EEESDSNASL RHQQDGQTET WDVHNDPSSK
101: MNVVDSGNND SQPGLDQIRK RTTKRCDLEG FRFSTSNYFT DSLSTDEAIE QDRAGLVRKL DKLKEQLVQP KEQQIPSSSS GFQKAPLRVF SSGRRIAGPS
201: YYQYYSEPEP PCLYNNNSDV SLHGPMHNPA NVPAYGDPHG FPMHERTLQP SHLHNSRQYI GNNGHDVFDT HPHNGMFHQS TCSCTHCYDP YHRASGSVFP
301: PSGLPDALRN PGFYPHERSF GFGTSLHSPR TFIPPGSQSP GPQLRGRCTS GFKDMRMNAV SRVHPSKPVS SSGGSRLIQP VAGGAPFINC INCFKLLKLP
401: EKIDSATRKK QRMRCGACSC VIDYSFVDKK LILSTDPASA RKPETHSRLR WETTANFSSD DYDNAAYEFH AMDRGSADVS TALVLISNTA QEMQITDATS
501: PSVSEDELSS DSSTVRKVNL ASPLHKQFEY SSINVRDRSG PRSQSSRSEQ DRVTLSKTAM RQNSMKEASV AIEMDVNDYS HNNEVSQDSA NDCTDDQGRT
601: KKGGFASIMK NSFKDLKKSI QNEGRSDVSI NGHPVAERLV KMAEKQAGPI RPGNYWYDYR AGFWGVLGSH CLGILPPFIE ELNYPMPENC AGGTTRVFVN
701: GRELHQKDLR LLTARGLPRD RDRSYTVYIS GRVIDEDTGE ELDSLGKLAP TVDKLKRGFG MRVPRRAT
101: MNVVDSGNND SQPGLDQIRK RTTKRCDLEG FRFSTSNYFT DSLSTDEAIE QDRAGLVRKL DKLKEQLVQP KEQQIPSSSS GFQKAPLRVF SSGRRIAGPS
201: YYQYYSEPEP PCLYNNNSDV SLHGPMHNPA NVPAYGDPHG FPMHERTLQP SHLHNSRQYI GNNGHDVFDT HPHNGMFHQS TCSCTHCYDP YHRASGSVFP
301: PSGLPDALRN PGFYPHERSF GFGTSLHSPR TFIPPGSQSP GPQLRGRCTS GFKDMRMNAV SRVHPSKPVS SSGGSRLIQP VAGGAPFINC INCFKLLKLP
401: EKIDSATRKK QRMRCGACSC VIDYSFVDKK LILSTDPASA RKPETHSRLR WETTANFSSD DYDNAAYEFH AMDRGSADVS TALVLISNTA QEMQITDATS
501: PSVSEDELSS DSSTVRKVNL ASPLHKQFEY SSINVRDRSG PRSQSSRSEQ DRVTLSKTAM RQNSMKEASV AIEMDVNDYS HNNEVSQDSA NDCTDDQGRT
601: KKGGFASIMK NSFKDLKKSI QNEGRSDVSI NGHPVAERLV KMAEKQAGPI RPGNYWYDYR AGFWGVLGSH CLGILPPFIE ELNYPMPENC AGGTTRVFVN
701: GRELHQKDLR LLTARGLPRD RDRSYTVYIS GRVIDEDTGE ELDSLGKLAP TVDKLKRGFG MRVPRRAT
Arabidopsis Description
Extra-large G-like protein, putative (DUF3133) [Source:UniProtKB/TrEMBL;Acc:Q0WVG1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.