Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU5Hr1G038090.3 | |
| HORVU5Hr1G057510.3 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G45920.1 | HORVU5Hr1G038090.3 | AT1G34430.1 | 21798944 |
| AT2G45920.1 | HORVU5Hr1G057510.3 | AT2G46550.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G207800.1 | Wheat | cytosol | 66.39 | 54.86 |
| TraesCS1B01G221500.1 | Wheat | cytosol | 66.81 | 53.36 |
| TraesCS1D01G211100.1 | Wheat | cytosol | 66.39 | 51.8 |
| HORVU1Hr1G053260.5 | Barley | cytosol | 56.3 | 33.09 |
| Bra007601.1-P | Field mustard | cytosol | 22.69 | 30.34 |
| Os10t0552400-01 | Rice | cytosol | 54.62 | 30.16 |
| Zm00001d029847_P001 | Maize | cytosol | 55.46 | 25.88 |
| Bra014438.1-P | Field mustard | cytosol | 28.99 | 24.82 |
| CDX89114 | Canola | cytosol | 28.99 | 24.21 |
| CDY27349 | Canola | cytosol | 26.89 | 24.06 |
| CDY42502 | Canola | cytosol | 27.31 | 23.81 |
| CDY37075 | Canola | cytosol | 26.47 | 23.68 |
| Bra039304.1-P | Field mustard | cytosol | 26.47 | 23.68 |
| HORVU5Hr1G077580.3 | Barley | plastid | 18.07 | 22.75 |
| CDX95679 | Canola | cytosol, extracellular, plastid | 12.18 | 22.48 |
| OQU92181 | Sorghum | endoplasmic reticulum | 53.78 | 22.18 |
| CDY48922 | Canola | cytosol | 26.89 | 21.99 |
| CDX71740 | Canola | cytosol | 24.79 | 21.77 |
| CDY18888 | Canola | nucleus | 26.05 | 21.75 |
| CDX74775 | Canola | cytosol | 25.63 | 21.48 |
| Bra004948.1-P | Field mustard | cytosol | 25.21 | 21.13 |
| AT1G01680.1 | Thale cress | cytosol | 24.37 | 18.83 |
| AT3G61410.3 | Thale cress | cytosol | 25.21 | 18.18 |
| Bra000412.1-P | Field mustard | cytosol | 21.01 | 17.67 |
| CDX83380 | Canola | cytosol | 21.01 | 17.67 |
| CDX90051 | Canola | cytosol | 22.27 | 17.26 |
| CDY15161 | Canola | cytosol | 21.85 | 16.99 |
| Bra014439.1-P | Field mustard | cytosol | 23.11 | 16.13 |
| CDX89113 | Canola | cytosol | 23.11 | 16.13 |
| Bra033242.1-P | Field mustard | nucleus | 17.23 | 15.71 |
| CDY42501 | Canola | cytosol | 22.27 | 15.54 |
| CDX71741 | Canola | nucleus | 26.05 | 15.35 |
| Bra003448.1-P | Field mustard | nucleus | 25.21 | 14.15 |
| AT2G45920.1 | Thale cress | cytosol | 23.53 | 14.0 |
| Bra007600.1-P | Field mustard | cytosol | 25.21 | 13.7 |
| CDY48923 | Canola | cytosol | 25.21 | 13.7 |
| CDY51567 | Canola | nucleus | 22.69 | 13.24 |
| AT3G61390.2 | Thale cress | cytosol | 23.53 | 12.87 |
| Bra033243.1-P | Field mustard | cytosol, plastid | 24.79 | 11.43 |
| Bra010318.1-P | Field mustard | cytosol | 23.95 | 10.34 |
| AT1G01670.1 | Thale cress | nucleus | 15.55 | 10.14 |
| AT1G01660.2 | Thale cress | nucleus | 23.95 | 10.02 |
| CDX90050 | Canola | nucleus | 23.53 | 9.84 |
| Bra033244.1-P | Field mustard | cytosol | 21.43 | 9.55 |
| CDY15162 | Canola | nucleus | 21.85 | 9.15 |
| VIT_00s0772g00010.t01 | Wine grape | cytosol | 23.11 | 8.41 |
| KRH39466 | Soybean | cytosol | 22.27 | 6.62 |
| Bra024393.1-P | Field mustard | cytosol | 21.43 | 6.39 |
| CDY67215 | Canola | cytosol | 21.01 | 6.27 |
| CDY14575 | Canola | cytosol | 21.01 | 6.27 |
| AT5G65500.2 | Thale cress | cytosol | 21.01 | 6.26 |
| KRH74477 | Soybean | cytosol | 21.01 | 6.24 |
| CDY54713 | Canola | cytosol | 20.59 | 6.14 |
| KRG99475 | Soybean | cytosol | 20.59 | 6.14 |
| Bra037819.1-P | Field mustard | cytosol | 20.59 | 6.14 |
| CDX81289 | Canola | cytosol | 20.59 | 6.13 |
| Solyc11g010700.1.1 | Tomato | cytosol | 16.81 | 5.01 |
| PGSC0003DMT400041610 | Potato | cytosol | 2.94 | 1.34 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G053230.7 | EnsemblPlantsGene:HORVU1Hr1G053230 | Gene3D:3.40.50.620 | InterPro:IPR014729 | InterPro:Rossmann-like_a/b/a_fold | PANTHER:PTHR27003 |
| PANTHER:PTHR27003:SF1 | SEG:seg | SUPFAM:SSF52402 | UniParc:UPI000B45FA78 | UniProt:A0A287FM30 | MapMan:35.1 |
Description
No Description!
Coordinates
chrchr1H:-:393639040..393640599
Molecular Weight (calculated)
26285.0 Da
IEP (calculated)
7.312
GRAVY (calculated)
-0.041
Length
238 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAAAEDEKV FVAVPAEPRA GQSTLSWALR HLYGGAGTTV VVAHVHVPPQ MIPIMGVKFH ASKLSPEPVR AFRRAERERA DEVLDDYVHQ CSEIKVKCEK
101: LVIEKEDAAS GLVELIRLHR VTKLVIAAAA DRHYTSKLDK PVSRTATEIM QRADPSCKIW FVCKEQLVCT RDKEVQIASL TVPAPLPTNL GHEAQHLQPP
201: QEEVHQIMQS HLLIPGTAFC KITGSITCAS LFLLTFVG
101: LVIEKEDAAS GLVELIRLHR VTKLVIAAAA DRHYTSKLDK PVSRTATEIM QRADPSCKIW FVCKEQLVCT RDKEVQIASL TVPAPLPTNL GHEAQHLQPP
201: QEEVHQIMQS HLLIPGTAFC KITGSITCAS LFLLTFVG
001: MALVSPIPAM GERAGSMRFH GIGSPGSRSS RSGIMDEPVS RLIDEKIFVA VDKHVAKSKS TLIWALQNTG GKKICLIHVH QPSQMIPLMG AKFPVGAVKE
101: EEVRVFREKE REKVHMILDD YLRICQQRGV RAEKMFIEME SIENGIVQLI SELGIRKLVM GAAADRHYSR RMTDLKSRKA IFVRREAPTL CQIWFTCKGY
201: LIHTREATMD DTESEYASPR PSISASDLLQ TFSTPESEHQ HISRVQSTDS VQQLVSNGSS TEQSGRVSDG SLNTDEEERE SDGSEVTGSA TVMSSGHSSP
301: SSFPDGVDDS FNVKIRKATS EAHSSKQEAF AETLRRQKAE KNALDAIRRA KQSESAYSEE LKRRKDTEIA VAKEKERFIT IKNEQEVIME ELQSAMAQKA
401: MLESQIAKSD GTMEKLNQKL DIAVKLLQKL RDEREELQTE RDRALREAEE LRSHAETSTL QLPQYFTDFS FSEIEEATNH FDSTLKIGEG GYGSIYVGLL
501: RHTQVAIKML NPNSSQGPVE YQQEVDVLSK MRHPNIITLI GACPEGWSLV YEYLPGGSLE DRLTCKDNSP PLSWQNRVRI ATEICAALVF LHSNKAHSLV
601: HGDLKPANIL LDSNLVSKLS DFGTCSLLHP NGSKSVRTDV TGTVAYLDPE ASSSGELTPK SDVYSFGIIL LRLLTGRPAL RISNEVKYAL DNGTLNDLLD
701: PLAGDWPFVQ AEQLARLALR CCETVSENRP DLGTEVWRVL EPMRASSGGS SSFHLGRNEH RIAPPYFICP IFQEVMQDPH VAADGFTYEA EAIRAWLDSE
801: HDTSPMTNVK LSHTSLIANH ALRSAIQEWL QHHL
101: EEVRVFREKE REKVHMILDD YLRICQQRGV RAEKMFIEME SIENGIVQLI SELGIRKLVM GAAADRHYSR RMTDLKSRKA IFVRREAPTL CQIWFTCKGY
201: LIHTREATMD DTESEYASPR PSISASDLLQ TFSTPESEHQ HISRVQSTDS VQQLVSNGSS TEQSGRVSDG SLNTDEEERE SDGSEVTGSA TVMSSGHSSP
301: SSFPDGVDDS FNVKIRKATS EAHSSKQEAF AETLRRQKAE KNALDAIRRA KQSESAYSEE LKRRKDTEIA VAKEKERFIT IKNEQEVIME ELQSAMAQKA
401: MLESQIAKSD GTMEKLNQKL DIAVKLLQKL RDEREELQTE RDRALREAEE LRSHAETSTL QLPQYFTDFS FSEIEEATNH FDSTLKIGEG GYGSIYVGLL
501: RHTQVAIKML NPNSSQGPVE YQQEVDVLSK MRHPNIITLI GACPEGWSLV YEYLPGGSLE DRLTCKDNSP PLSWQNRVRI ATEICAALVF LHSNKAHSLV
601: HGDLKPANIL LDSNLVSKLS DFGTCSLLHP NGSKSVRTDV TGTVAYLDPE ASSSGELTPK SDVYSFGIIL LRLLTGRPAL RISNEVKYAL DNGTLNDLLD
701: PLAGDWPFVQ AEQLARLALR CCETVSENRP DLGTEVWRVL EPMRASSGGS SSFHLGRNEH RIAPPYFICP IFQEVMQDPH VAADGFTYEA EAIRAWLDSE
801: HDTSPMTNVK LSHTSLIANH ALRSAIQEWL QHHL
Arabidopsis Description
PUB33U-box domain-containing protein 33 [Source:UniProtKB/Swiss-Prot;Acc:Q8GUH1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.