Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- endoplasmic reticulum 1
- cytosol 2
- mitochondrion 3
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G46550.1 | HORVU6Hr1G072940.1 | AT1G54770.1 | 21798944 |
| AT2G46550.1 | HORVU1Hr1G025390.3 | AT3G01550.1 | 21798944 |
| AT2G46550.1 | HORVU3Hr1G024590.1 | AT3G01550.1 | 21798944 |
| AT2G46550.1 | HORVU3Hr1G079290.1 | AT3G60360.1 | 21798944 |
| AT2G46550.1 | HORVU1Hr1G074260.1 | AT4G09460.1 | 21798944 |
| AT2G46550.1 | HORVU3Hr1G082210.1 | AT4G09460.1 | 21798944 |
| AT2G46550.1 | HORVU4Hr1G018360.2 | AT4G09460.1 | 21798944 |
| AT2G46550.1 | HORVU5Hr1G036900.1 | AT4G09460.1 | 21798944 |
| AT2G46550.1 | HORVU4Hr1G043650.2 | AT5G51010.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G190300.1 | Wheat | cytosol, mitochondrion | 90.93 | 90.34 |
| TraesCS5D01G198100.1 | Wheat | cytosol, mitochondrion | 90.5 | 89.53 |
| TraesCS5A01G194900.2 | Wheat | cytosol, mitochondrion | 90.71 | 87.87 |
| Os09t0363500-01 | Rice | mitochondrion | 67.82 | 67.82 |
| KXG35486 | Sorghum | cytosol, mitochondrion, nucleus, plasma membrane | 62.42 | 61.62 |
| Zm00001d020233_P001 | Maize | mitochondrion | 61.77 | 61.37 |
| Zm00001d005653_P001 | Maize | nucleus | 58.1 | 57.73 |
| GSMUA_Achr7P24360_001 | Banana | nucleus | 18.14 | 51.22 |
| CDY68438 | Canola | nucleus | 5.62 | 41.27 |
| CDX99425 | Canola | nucleus | 5.62 | 41.27 |
| GSMUA_Achr3P32190_001 | Banana | mitochondrion, nucleus | 33.91 | 39.55 |
| GSMUA_Achr4P09100_001 | Banana | cytosol | 37.58 | 36.33 |
| AT1G01240.3 | Thale cress | mitochondrion | 24.19 | 33.84 |
| CDX85174 | Canola | nucleus | 14.9 | 33.82 |
| CDY61731 | Canola | nucleus | 22.68 | 33.55 |
| CDY15190 | Canola | mitochondrion | 22.03 | 32.8 |
| Bra039276.1-P | Field mustard | nucleus | 23.97 | 32.74 |
| Solyc01g096100.2.1 | Tomato | nucleus | 33.48 | 32.7 |
| CDY38000 | Canola | mitochondrion | 23.97 | 32.65 |
| CDY27317 | Canola | nucleus | 22.89 | 32.62 |
| PGSC0003DMT400000655 | Potato | mitochondrion | 32.83 | 32.34 |
| Bra032629.1-P | Field mustard | mitochondrion | 23.54 | 32.25 |
| CDX90019 | Canola | mitochondrion | 23.11 | 31.94 |
| AT2G46550.1 | Thale cress | nucleus, plastid | 26.57 | 30.98 |
| Bra033275.1-P | Field mustard | mitochondrion | 19.65 | 29.84 |
| VIT_16s0098g01690.t01 | Wine grape | nucleus, plastid | 31.75 | 28.94 |
| CDX80028 | Canola | nucleus, plastid | 24.19 | 28.79 |
| Bra004527.1-P | Field mustard | nucleus, plastid | 24.19 | 28.79 |
| CDY56879 | Canola | nucleus | 23.76 | 28.21 |
| Bra039275.1-P | Field mustard | nucleus | 10.8 | 27.93 |
| KRH64409 | Soybean | nucleus | 27.86 | 27.92 |
| KRH53526 | Soybean | nucleus | 27.43 | 27.55 |
| PGSC0003DMT400047670 | Potato | nucleus | 23.11 | 26.29 |
| Solyc03g083000.2.1 | Tomato | nucleus | 22.68 | 25.86 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G057510.3 | EnsemblPlantsGene:HORVU5Hr1G057510 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | PANTHER:PTHR33868 |
| PANTHER:PTHR33868:SF1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0002949314 | UniProt:M0V3I3 | MapMan:35.2 |
Description
No Description!
Coordinates
chrchr5H:+:450800405..450804161
Molecular Weight (calculated)
52003.3 Da
IEP (calculated)
7.682
GRAVY (calculated)
-0.805
Length
463 amino acids
Sequence
(BLAST)
(BLAST)
001: MTAAEARAAW QRAANRCLFQ EDAKRAPKLA CCPPSMQQQH EANSGNPTSP RDCHIPNFMH LNWNPMNSSQ PIDAWFLQLQ PNFGSHKVLS GDRLNYMGGE
101: ASAKKVDSFS PVSTLDDINT KKSECPSEPP WMVSTAFMKQ TSEAPCEGCP QASLKCRGNP NSLLREDKEF MEFKTFDPLF PKKPQKACYE MDPPWEQDRK
201: SQPWWQVADE EGLASLVAER AMQHIENNDL PKPTQVVRIH GPKLNGHENK DGCGNSSSSS QPQLHDTMMC SYSLSSTNET NSSDGGGWQQ SHKNDAHGGT
301: QDSYSSGDHT PGSKQTYQNQ KDAERAQLLD ALRHSQTRAR EAEVAAKNAH DEKDHVVKLL FRQASHLFAC KQWLKMLQLE NICLQLRLKE HQIAAMFPEL
401: PWTVMKEEKA EPEEERKGRA KKKSRRQNKE GGFCKAIMFA VGVGIVGAGL LLGWTFGWLL PRL
101: ASAKKVDSFS PVSTLDDINT KKSECPSEPP WMVSTAFMKQ TSEAPCEGCP QASLKCRGNP NSLLREDKEF MEFKTFDPLF PKKPQKACYE MDPPWEQDRK
201: SQPWWQVADE EGLASLVAER AMQHIENNDL PKPTQVVRIH GPKLNGHENK DGCGNSSSSS QPQLHDTMMC SYSLSSTNET NSSDGGGWQQ SHKNDAHGGT
301: QDSYSSGDHT PGSKQTYQNQ KDAERAQLLD ALRHSQTRAR EAEVAAKNAH DEKDHVVKLL FRQASHLFAC KQWLKMLQLE NICLQLRLKE HQIAAMFPEL
401: PWTVMKEEKA EPEEERKGRA KKKSRRQNKE GGFCKAIMFA VGVGIVGAGL LLGWTFGWLL PRL
001: MAAAEARAVW QRTVNRCFVQ EDAKRAPKLT YCQSSSSSTA SSTKQVEVSG SSPRVSVEPR TQSSCAGFMP LPRNPNFPDL LPHNTRLWSH PHHQFQVNKK
101: QPLEDEVNNQ GVSEKKSELG AGEKQGKSFN SESFQEFIEL METRESYGST GYDESSEKKL SELSFDPSSP WNLLSSEKAA PWWRTTDKDE LASLVAQRSL
201: DYVENCDLPT PQKMKRSYYG SPRGFDSDGL RDYSVSGQTI KGTSKGSSCK NRPEASSESD LSKSELLEAL RRSQTRAREA ENMAKEAYAE KEHLVKILLK
301: QAAELFGYKQ WLQLLQLEAL YLQIKNKEID NKNNDDPGVS IPCWSNGKAR KEGRKRRSKR GKPNGAKYAV GLALGMSLVG AGLLLGWTVG WMQMLSF
101: QPLEDEVNNQ GVSEKKSELG AGEKQGKSFN SESFQEFIEL METRESYGST GYDESSEKKL SELSFDPSSP WNLLSSEKAA PWWRTTDKDE LASLVAQRSL
201: DYVENCDLPT PQKMKRSYYG SPRGFDSDGL RDYSVSGQTI KGTSKGSSCK NRPEASSESD LSKSELLEAL RRSQTRAREA ENMAKEAYAE KEHLVKILLK
301: QAAELFGYKQ WLQLLQLEAL YLQIKNKEID NKNNDDPGVS IPCWSNGKAR KEGRKRRSKR GKPNGAKYAV GLALGMSLVG AGLLLGWTVG WMQMLSF
Arabidopsis Description
Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9ZPY4]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.