Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 3
- nucleus 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG35486 | Sorghum | cytosol, mitochondrion, nucleus, plasma membrane | 84.98 | 84.44 |
| Zm00001d005653_P001 | Maize | nucleus | 73.18 | 73.18 |
| Os09t0363500-01 | Rice | mitochondrion | 64.81 | 65.23 |
| HORVU5Hr1G057510.3 | Barley | cytosol, mitochondrion | 61.37 | 61.77 |
| TraesCS5D01G198100.1 | Wheat | cytosol, mitochondrion | 60.73 | 60.47 |
| TraesCS5B01G190300.1 | Wheat | cytosol, mitochondrion | 59.44 | 59.44 |
| TraesCS5A01G194900.2 | Wheat | cytosol, mitochondrion | 60.73 | 59.2 |
| GSMUA_Achr7P24360_001 | Banana | nucleus | 18.88 | 53.66 |
| Zm00001d032283_P004 | Maize | mitochondrion | 48.07 | 46.76 |
| GSMUA_Achr3P32190_001 | Banana | mitochondrion, nucleus | 35.41 | 41.56 |
| AT1G01240.3 | Thale cress | mitochondrion | 25.97 | 36.56 |
| CDX85174 | Canola | nucleus | 15.67 | 35.78 |
| CDX99425 | Canola | nucleus | 4.72 | 34.92 |
| CDY68438 | Canola | nucleus | 4.72 | 34.92 |
| GSMUA_Achr4P09100_001 | Banana | cytosol | 35.84 | 34.86 |
| CDY61731 | Canola | nucleus | 23.39 | 34.82 |
| CDY15190 | Canola | mitochondrion | 22.96 | 34.41 |
| Bra039276.1-P | Field mustard | nucleus | 24.89 | 34.22 |
| CDY27317 | Canola | nucleus | 23.82 | 34.15 |
| CDX90019 | Canola | mitochondrion | 24.25 | 33.73 |
| Bra032629.1-P | Field mustard | mitochondrion | 24.46 | 33.73 |
| CDY38000 | Canola | mitochondrion | 24.46 | 33.53 |
| Solyc01g096100.2.1 | Tomato | nucleus | 33.91 | 33.33 |
| PGSC0003DMT400000655 | Potato | mitochondrion | 33.48 | 33.19 |
| AT2G46550.1 | Thale cress | nucleus, plastid | 27.04 | 31.74 |
| KRH53526 | Soybean | nucleus | 30.69 | 31.02 |
| Bra039275.1-P | Field mustard | nucleus | 11.8 | 30.73 |
| CDX80028 | Canola | nucleus, plastid | 25.54 | 30.59 |
| Bra004527.1-P | Field mustard | nucleus, plastid | 25.54 | 30.59 |
| Bra033275.1-P | Field mustard | mitochondrion | 19.74 | 30.16 |
| CDY56879 | Canola | nucleus | 24.89 | 29.74 |
| KRH64409 | Soybean | nucleus | 28.97 | 29.22 |
| VIT_16s0098g01690.t01 | Wine grape | nucleus, plastid | 31.12 | 28.54 |
| Solyc03g083000.2.1 | Tomato | nucleus | 22.1 | 25.37 |
| PGSC0003DMT400047670 | Potato | nucleus | 21.89 | 25.06 |
Protein Annotations
| EnsemblPlants:Zm00001d020233_P001 | EnsemblPlants:Zm00001d020233_T001 | EnsemblPlantsGene:Zm00001d020233 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR33868 | PANTHER:PTHR33868:SF1 | ProteinID:ONM54585.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI00084237D5 |
| UniProt:A0A1D6I352 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr7:+:101487360..101490008
Molecular Weight (calculated)
51842.4 Da
IEP (calculated)
7.007
GRAVY (calculated)
-0.627
Length
466 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAEARAAW QRAANRCLVQ EDAKRAPKLA CCPPSLRPHD TSDGNPPSPQ DLHAPMFMPI NWNLMNSSMP METQWWLQLQ PSFGCQTALA REHLNYVGGD
101: AAKGMEGLAP VSKLEDVQAK TVDPFEPPWI VSTTLMKQTP DTGSEELKNL ASYTPASLKC KGNANKCIYE DKEFTEFKAF DPLFPNKPQK EHCEMHAPWE
201: ETKKSQPWWQ VADVDGLASL VAERAMENIV NNDLPRPTQT VRVHGPQVKG PENKDDYGMS VVSGGQEPDP VHDTMECSYS VSSTTNDMNS SDGGRWQHHE
301: RNNVSGDARG SYSSTNSTPG SKPTYQDASE RAKLLDALRH SQTRAREAEI AAKKAYDEKD HVIKLLFRQA SHLFACKQWL KMLQLENICL QLRFKEHQIA
401: TMFPDLPWML VKEKVAPSQE HNEGARKKGK RPNRKGGLCD AVAFAVGVGI VGAGLLLGWT LGWLLP
101: AAKGMEGLAP VSKLEDVQAK TVDPFEPPWI VSTTLMKQTP DTGSEELKNL ASYTPASLKC KGNANKCIYE DKEFTEFKAF DPLFPNKPQK EHCEMHAPWE
201: ETKKSQPWWQ VADVDGLASL VAERAMENIV NNDLPRPTQT VRVHGPQVKG PENKDDYGMS VVSGGQEPDP VHDTMECSYS VSSTTNDMNS SDGGRWQHHE
301: RNNVSGDARG SYSSTNSTPG SKPTYQDASE RAKLLDALRH SQTRAREAEI AAKKAYDEKD HVIKLLFRQA SHLFACKQWL KMLQLENICL QLRFKEHQIA
401: TMFPDLPWML VKEKVAPSQE HNEGARKKGK RPNRKGGLCD AVAFAVGVGI VGAGLLLGWT LGWLLP
001: MAAAEARAVW QRTVNRCFVQ EDAKRAPKLT YCQSSSSSTA SSTKQVEVSG SSPRVSVEPR TQSSCAGFMP LPRNPNFPDL LPHNTRLWSH PHHQFQVNKK
101: QPLEDEVNNQ GVSEKKSELG AGEKQGKSFN SESFQEFIEL METRESYGST GYDESSEKKL SELSFDPSSP WNLLSSEKAA PWWRTTDKDE LASLVAQRSL
201: DYVENCDLPT PQKMKRSYYG SPRGFDSDGL RDYSVSGQTI KGTSKGSSCK NRPEASSESD LSKSELLEAL RRSQTRAREA ENMAKEAYAE KEHLVKILLK
301: QAAELFGYKQ WLQLLQLEAL YLQIKNKEID NKNNDDPGVS IPCWSNGKAR KEGRKRRSKR GKPNGAKYAV GLALGMSLVG AGLLLGWTVG WMQMLSF
101: QPLEDEVNNQ GVSEKKSELG AGEKQGKSFN SESFQEFIEL METRESYGST GYDESSEKKL SELSFDPSSP WNLLSSEKAA PWWRTTDKDE LASLVAQRSL
201: DYVENCDLPT PQKMKRSYYG SPRGFDSDGL RDYSVSGQTI KGTSKGSSCK NRPEASSESD LSKSELLEAL RRSQTRAREA ENMAKEAYAE KEHLVKILLK
301: QAAELFGYKQ WLQLLQLEAL YLQIKNKEID NKNNDDPGVS IPCWSNGKAR KEGRKRRSKR GKPNGAKYAV GLALGMSLVG AGLLLGWTVG WMQMLSF
Arabidopsis Description
Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9ZPY4]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.