Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | nucleus | 43.27 | 79.87 |
| Zm00001d053060_P001 | Maize | nucleus | 80.73 | 77.08 |
| GSMUA_Achr2P20600_001 | Banana | nucleus | 45.82 | 72.0 |
| OQU83016 | Sorghum | nucleus | 80.0 | 69.84 |
| GSMUA_Achr6P07260_001 | Banana | mitochondrion | 45.09 | 62.31 |
| Zm00001d022628_P001 | Maize | nucleus | 49.09 | 61.93 |
| GSMUA_Achr3P22200_001 | Banana | nucleus | 48.73 | 61.75 |
| GSMUA_Achr8P32480_001 | Banana | nucleus | 44.0 | 60.5 |
| GSMUA_Achr5P26000_001 | Banana | nucleus | 46.18 | 60.48 |
| GSMUA_Achr10P... | Banana | nucleus | 46.55 | 58.99 |
| GSMUA_Achr6P25420_001 | Banana | nucleus | 49.82 | 57.81 |
| Zm00001d012255_P001 | Maize | nucleus | 52.0 | 56.97 |
| TraesCS4A01G217800.1 | Wheat | nucleus | 59.64 | 56.94 |
| TraesCS4D01G092900.1 | Wheat | nucleus | 59.64 | 56.75 |
| Os11t0180900-00 | Rice | nucleus | 60.73 | 56.61 |
| Zm00001d041853_P001 | Maize | nucleus | 45.82 | 55.75 |
| AT1G35515.1 | Thale cress | nucleus | 42.55 | 55.19 |
| Zm00001d038338_P001 | Maize | nucleus | 51.27 | 54.65 |
| CDX90721 | Canola | nucleus | 43.64 | 53.57 |
| Bra000680.1-P | Field mustard | nucleus | 43.64 | 53.57 |
| GSMUA_Achr5P17010_001 | Banana | nucleus | 46.91 | 53.53 |
| Zm00001d042665_P001 | Maize | nucleus | 50.55 | 53.05 |
| CDY05057 | Canola | nucleus | 43.27 | 52.42 |
| Zm00001d032024_P001 | Maize | nucleus | 48.0 | 51.97 |
| GSMUA_Achr9P08600_001 | Banana | nucleus | 51.27 | 51.84 |
| Zm00001d010201_P001 | Maize | nucleus | 46.18 | 51.0 |
| AT4G09460.1 | Thale cress | nucleus | 43.27 | 50.42 |
| Zm00001d006236_P002 | Maize | nucleus | 49.45 | 49.82 |
| Zm00001d053220_P001 | Maize | nucleus | 46.55 | 49.23 |
| Solyc06g065100.2.1 | Tomato | nucleus | 49.45 | 48.75 |
| PGSC0003DMT400080427 | Potato | nucleus | 48.73 | 47.02 |
| VIT_07s0130g00040.t01 | Wine grape | nucleus | 49.09 | 46.55 |
| HORVU4Hr1G018360.2 | Barley | nucleus | 61.09 | 46.03 |
| GSMUA_Achr6P12930_001 | Banana | nucleus | 47.64 | 45.8 |
| KRH54016 | Soybean | nucleus | 49.82 | 45.51 |
| KRH63931 | Soybean | nucleus | 49.82 | 45.36 |
| TraesCS4B01G096500.1 | Wheat | nucleus, plastid | 60.36 | 43.57 |
| Zm00001d011645_P001 | Maize | nucleus | 30.18 | 36.09 |
| Zm00001d044975_P001 | Maize | nucleus | 30.18 | 30.51 |
| Zm00001d037118_P001 | Maize | nucleus | 29.45 | 29.67 |
| Zm00001d028842_P001 | Maize | nucleus | 33.82 | 27.76 |
| Zm00001d047671_P001 | Maize | nucleus | 32.73 | 26.16 |
| Zm00001d040621_P002 | Maize | nucleus | 32.36 | 25.14 |
Protein Annotations
| EnsemblPlants:Zm00001d004744_P001 | EnsemblPlants:Zm00001d004744_T001 | EnsemblPlantsGene:Zm00001d004744 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF951 | PFAM:PF00249 | PFscan:PS51294 | ProteinID:ONM19521.1 | SEG:seg |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI000189D452 | UniProt:A0A1D6EHB9 | MapMan:15.5.2.1 | : |
Description
MYB-transcription factor 64Transcription repressor MYB6
Coordinates
chr2:-:135504533..135506004
Molecular Weight (calculated)
30257.6 Da
IEP (calculated)
8.488
GRAVY (calculated)
-0.690
Length
275 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRSPCCEQA HTNKGAWTKE EDQRLIAYIK AHGEGCWRSL PKAAGLLRCG KSCRLRWINY LRPDLKRGNF SEEEDELIIK FHELFGNKWS LIAGRLPGRT
101: DNEIKNYWNT HIKRKLLARG MDPQTHRPLA AAPAGGPQQQ HCHYQMEPQK RAAAADHSEA AVATNSPEAS SRSSDDDEAP ALAPPPRRRQ RHLDIDLNLS
201: ISLAAYQPPE GTGSAIEPLT ATTKREEGTA AAVCLCLNSL GYRAGVECAC GSGGSPSSRS QWARDFLQAA PCYRG
101: DNEIKNYWNT HIKRKLLARG MDPQTHRPLA AAPAGGPQQQ HCHYQMEPQK RAAAADHSEA AVATNSPEAS SRSSDDDEAP ALAPPPRRRQ RHLDIDLNLS
201: ISLAAYQPPE GTGSAIEPLT ATTKREEGTA AAVCLCLNSL GYRAGVECAC GSGGSPSSRS QWARDFLQAA PCYRG
001: MGRSPCCEKA HMNKGAWTKE EDQRLIDYIR NHGEGSWRSL PKSVGLLRCG KSCRLRWINY LRPDLKRGNF TDGEEQIIVK LHSLFGNKWS LIAGKLPGRT
101: DNEIKNYWNT HIKRKLLNRG IDPKTHGSII EPKTTSFHPR NEDLKSTFPG SVKLKMETSC ENCASTSGTT TDEDLRLSVD CDYRYDHLDK ELNLDLTLGY
201: SPTRFVGVGS CY
101: DNEIKNYWNT HIKRKLLNRG IDPKTHGSII EPKTTSFHPR NEDLKSTFPG SVKLKMETSC ENCASTSGTT TDEDLRLSVD CDYRYDHLDK ELNLDLTLGY
201: SPTRFVGVGS CY
Arabidopsis Description
MYB8Transcription factor MYB8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SDS8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.