Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G22640.1 | KRH10835 | AT4G21670.1 | 18541146 |
| AT1G22640.1 | KRH20483 | AT4G21670.1 | 18541146 |
| AT1G22640.1 | KRH21480 | AT4G21670.1 | 18541146 |
| AT1G22640.1 | KRH50009 | AT4G21670.1 | 18541146 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH54016 | Soybean | nucleus | 92.05 | 92.36 |
| GSMUA_AchrUn_... | Banana | nucleus | 39.4 | 79.87 |
| GSMUA_Achr2P20600_001 | Banana | nucleus | 42.38 | 73.14 |
| KRH60702 | Soybean | nucleus | 45.7 | 65.71 |
| GSMUA_Achr6P07260_001 | Banana | mitochondrion | 42.72 | 64.82 |
| GSMUA_Achr3P22200_001 | Banana | nucleus | 46.03 | 64.06 |
| VIT_07s0130g00040.t01 | Wine grape | nucleus | 59.93 | 62.41 |
| GSMUA_Achr5P26000_001 | Banana | nucleus | 43.38 | 62.38 |
| GSMUA_Achr8P32480_001 | Banana | nucleus | 40.07 | 60.5 |
| EES16743 | Sorghum | nucleus | 43.05 | 60.47 |
| GSMUA_Achr10P... | Banana | nucleus | 43.38 | 60.37 |
| KRH51400 | Soybean | nucleus | 46.69 | 60.0 |
| KRG94424 | Soybean | nucleus | 18.21 | 59.78 |
| KRH29280 | Soybean | nucleus | 48.68 | 59.76 |
| GSMUA_Achr6P25420_001 | Banana | nucleus | 46.36 | 59.07 |
| TraesCS1A01G268800.1 | Wheat | nucleus | 47.68 | 58.3 |
| TraesCS1D01G268900.1 | Wheat | nucleus | 47.68 | 58.3 |
| GSMUA_Achr5P17010_001 | Banana | nucleus | 46.36 | 58.09 |
| KRH24301 | Soybean | nucleus | 48.34 | 57.71 |
| HORVU1Hr1G074260.1 | Barley | nucleus | 47.68 | 57.37 |
| TraesCS1B01G279400.1 | Wheat | nucleus | 46.69 | 57.09 |
| CDX91687 | Canola | nucleus | 42.38 | 56.89 |
| KRH41018 | Soybean | nucleus | 41.06 | 56.88 |
| Zm00001d041853_P001 | Maize | nucleus | 42.05 | 56.19 |
| Zm00001d012255_P001 | Maize | nucleus | 46.69 | 56.18 |
| Os05t0429900-01 | Rice | nucleus | 47.68 | 55.38 |
| Zm00001d038338_P001 | Maize | nucleus | 46.69 | 54.65 |
| KXG22070 | Sorghum | nucleus | 46.69 | 53.82 |
| Zm00001d042665_P001 | Maize | nucleus | 46.69 | 53.82 |
| TraesCS5A01G111300.1 | Wheat | nucleus | 43.05 | 53.28 |
| EES01839 | Sorghum | nucleus | 47.35 | 53.16 |
| Zm00001d010201_P001 | Maize | nucleus | 43.71 | 53.01 |
| TraesCS3A01G384400.1 | Wheat | nucleus | 46.69 | 52.81 |
| HORVU3Hr1G082210.1 | Barley | nucleus | 47.02 | 52.59 |
| AT1G22640.1 | Thale cress | nucleus | 44.7 | 52.53 |
| TraesCS3B01G416400.1 | Wheat | nucleus | 46.36 | 52.43 |
| TraesCS3D01G377300.1 | Wheat | nucleus | 46.69 | 52.03 |
| Solyc06g065100.2.1 | Tomato | nucleus | 48.01 | 51.97 |
| GSMUA_Achr9P08600_001 | Banana | nucleus | 46.69 | 51.84 |
| PGSC0003DMT400080427 | Potato | nucleus | 48.68 | 51.58 |
| AT2G16720.1 | Thale cress | nucleus | 45.7 | 51.3 |
| Bra024526.1-P | Field mustard | nucleus | 45.03 | 50.56 |
| CDY04798 | Canola | nucleus | 45.03 | 50.56 |
| CDY21378 | Canola | nucleus | 45.03 | 50.56 |
| Os01t0874300-01 | Rice | extracellular, nucleus | 47.68 | 50.17 |
| CDY25747 | Canola | nucleus | 43.71 | 50.0 |
| HORVU5Hr1G036900.1 | Barley | nucleus | 43.71 | 50.0 |
| Zm00001d004744_P001 | Maize | nucleus | 45.36 | 49.82 |
| KRH15114 | Soybean | nucleus | 30.79 | 49.73 |
| Os11t0180900-00 | Rice | nucleus | 47.68 | 48.81 |
| AT4G34990.1 | Thale cress | nucleus | 44.04 | 48.54 |
| TraesCS4A01G217800.1 | Wheat | nucleus | 46.03 | 48.26 |
| TraesCS5B01G119300.1 | Wheat | nucleus | 43.38 | 48.16 |
| TraesCS4D01G092900.1 | Wheat | nucleus | 46.03 | 48.1 |
| Bra017685.1-P | Field mustard | nucleus | 43.05 | 47.97 |
| CDX72510 | Canola | nucleus | 43.05 | 47.97 |
| CDY40652 | Canola | nucleus | 43.05 | 47.97 |
| GSMUA_Achr10P... | Banana | nucleus | 45.03 | 47.89 |
| Bra012337.1-P | Field mustard | nucleus | 43.71 | 47.83 |
| KRG89277 | Soybean | nucleus | 35.1 | 47.53 |
| CDY12520 | Canola | nucleus | 42.72 | 47.43 |
| Zm00001d053060_P001 | Maize | nucleus | 45.03 | 47.22 |
| CDX69102 | Canola | nucleus | 44.7 | 47.2 |
| Bra011576.1-P | Field mustard | nucleus | 44.7 | 47.04 |
| CDX75478 | Canola | nucleus | 44.7 | 47.04 |
| KRH73023 | Soybean | nucleus | 34.11 | 46.82 |
| KRH50345 | Soybean | nucleus | 35.76 | 46.75 |
| CDY02243 | Canola | nucleus | 44.04 | 46.34 |
| CDY72116 | Canola | nucleus | 44.04 | 46.34 |
| Bra013055.1-P | Field mustard | nucleus | 44.04 | 46.18 |
| GSMUA_Achr5P01180_001 | Banana | nucleus | 39.74 | 46.15 |
| GSMUA_Achr6P12930_001 | Banana | nucleus | 43.71 | 46.15 |
| OQU78830 | Sorghum | nucleus | 43.05 | 46.1 |
| OQU83016 | Sorghum | nucleus | 46.03 | 44.13 |
| TraesCS5D01G128200.2 | Wheat | nucleus | 43.38 | 42.81 |
| KRH77336 | Soybean | nucleus | 24.83 | 41.21 |
| KRH28144 | Soybean | nucleus | 24.17 | 39.89 |
| KRH12516 | Soybean | nucleus | 23.84 | 39.78 |
| HORVU4Hr1G018360.2 | Barley | nucleus | 46.69 | 38.63 |
| KRG97208 | Soybean | nucleus | 35.1 | 37.72 |
| KRH04166 | Soybean | nucleus | 24.5 | 37.56 |
| TraesCS4B01G096500.1 | Wheat | nucleus, plastid | 46.69 | 37.01 |
| KRH47594 | Soybean | nucleus | 33.11 | 36.5 |
| KRH68929 | Soybean | nucleus | 29.14 | 35.92 |
| KRH06177 | Soybean | nucleus | 33.11 | 35.09 |
| KRH47884 | Soybean | nucleus | 33.11 | 34.48 |
| KRH06443 | Soybean | nucleus | 32.45 | 33.45 |
| KRH47591 | Soybean | nucleus | 28.81 | 32.83 |
| KRH06175 | Soybean | nucleus | 28.81 | 32.34 |
| KRH19274 | Soybean | nucleus | 30.79 | 30.59 |
| KRH02634 | Soybean | nucleus | 30.79 | 30.29 |
| KRG91990 | Soybean | nucleus | 26.82 | 29.56 |
| KRH34790 | Soybean | nucleus | 26.82 | 29.56 |
| KRH11988 | Soybean | nucleus | 31.79 | 29.09 |
| KRG91991 | Soybean | nucleus | 26.16 | 29.04 |
| KRH37017 | Soybean | nucleus | 31.46 | 28.44 |
| KRH17997 | Soybean | nucleus, plastid | 33.11 | 28.25 |
| KRH34791 | Soybean | nucleus | 25.5 | 28.21 |
| KRH50769 | Soybean | nucleus | 31.46 | 28.19 |
| KRH16413 | Soybean | nucleus | 32.12 | 26.87 |
| KRH02323 | Soybean | nucleus | 30.46 | 26.29 |
| KRG96503 | Soybean | nucleus | 30.13 | 25.71 |
| KRH31822 | Soybean | nucleus | 28.81 | 25.44 |
| KRH69237 | Soybean | nucleus | 31.13 | 25.34 |
| KRH68241 | Soybean | nucleus | 29.14 | 24.51 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EMBL:ACUP02002729 | EnsemblPlantsGene:GLYMA_04G205100 | GO:GO:0000981 | GO:GO:0001135 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 | GO:GO:0044212 |
| InterPro:Homeobox-like_sf | UniProt:I1JXV2 | InterPro:IPR017930 | EnsemblPlants:KRH63931 | ProteinID:KRH63931 | ProteinID:KRH63931.1 |
| InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF651 | InterPro:SANT/Myb |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0002339673 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr4:-:47774588..47775933
Molecular Weight (calculated)
33783.5 Da
IEP (calculated)
8.466
GRAVY (calculated)
-0.788
Length
302 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRSPCCEKE HTNKGAWTKE EDERLINYIK LHGEGCWRSL PKAAGLLRCG KSCRLRWINY LRPDLKRGNF TEEEDELIIN LHSLLGNKWS LIAARLPGRT
101: DNEIKNYWNT HIKRKLYSRG IDPQTHRPLN ASATPATTAT ATAVPSANSS KKINNNNNNI DNDINNNNNG FQLVSNSAYA NTKIGTNLVA AEDSNSSSGV
201: TTEESVPHHQ LNLDLSIGLP SQPQGSSLNP EKLKPEPQEH DDQKPQVLYK WYGNITSQQG VCLCYNLGLQ SNQTCYCKTM GTATTTTATD SNLYRFYRPM
301: NI
101: DNEIKNYWNT HIKRKLYSRG IDPQTHRPLN ASATPATTAT ATAVPSANSS KKINNNNNNI DNDINNNNNG FQLVSNSAYA NTKIGTNLVA AEDSNSSSGV
201: TTEESVPHHQ LNLDLSIGLP SQPQGSSLNP EKLKPEPQEH DDQKPQVLYK WYGNITSQQG VCLCYNLGLQ SNQTCYCKTM GTATTTTATD SNLYRFYRPM
301: NI
001: MGRSPCCEKA HMNKGAWTKE EDQLLVDYIR KHGEGCWRSL PRAAGLQRCG KSCRLRWMNY LRPDLKRGNF TEEEDELIIK LHSLLGNKWS LIAGRLPGRT
101: DNEIKNYWNT HIKRKLLSRG IDPNSHRLIN ESVVSPSSLQ NDVVETIHLD FSGPVKPEPV REEIGMVNNC ESSGTTSEKD YGNEEDWVLN LELSVGPSYR
201: YESTRKVSVV DSAESTRRWG SELFGAHESD AVCLCCRIGL FRNESCRNCR VSDVRTH
101: DNEIKNYWNT HIKRKLLSRG IDPNSHRLIN ESVVSPSSLQ NDVVETIHLD FSGPVKPEPV REEIGMVNNC ESSGTTSEKD YGNEEDWVLN LELSVGPSYR
201: YESTRKVSVV DSAESTRRWG SELFGAHESD AVCLCCRIGL FRNESCRNCR VSDVRTH
Arabidopsis Description
MYB3MYB3 [Source:UniProtKB/TrEMBL;Acc:A0A178WFN1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.