Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G111300.1 | Wheat | nucleus | 85.29 | 95.08 |
| HORVU5Hr1G036900.1 | Barley | nucleus | 88.24 | 90.91 |
| TraesCS5D01G128200.2 | Wheat | nucleus | 98.9 | 87.91 |
| GSMUA_AchrUn_... | Banana | nucleus | 44.49 | 81.21 |
| GSMUA_Achr2P20600_001 | Banana | nucleus | 48.9 | 76.0 |
| GSMUA_Achr5P26000_001 | Banana | nucleus | 48.53 | 62.86 |
| GSMUA_Achr6P07260_001 | Banana | mitochondrion | 45.59 | 62.31 |
| GSMUA_Achr3P22200_001 | Banana | nucleus | 47.79 | 59.91 |
| GSMUA_Achr8P32480_001 | Banana | nucleus | 43.75 | 59.5 |
| GSMUA_Achr10P... | Banana | nucleus | 45.59 | 57.14 |
| GSMUA_Achr6P25420_001 | Banana | nucleus | 49.26 | 56.54 |
| TraesCS1B01G279400.1 | Wheat | nucleus | 50.37 | 55.47 |
| TraesCS7B01G169900.1 | Wheat | nucleus | 47.79 | 55.32 |
| AT1G35515.1 | Thale cress | nucleus | 41.18 | 52.83 |
| CDX90721 | Canola | nucleus | 43.38 | 52.68 |
| Bra000680.1-P | Field mustard | nucleus | 43.38 | 52.68 |
| GSMUA_Achr5P17010_001 | Banana | nucleus | 45.96 | 51.87 |
| CDY05057 | Canola | nucleus | 43.01 | 51.54 |
| TraesCS3B01G416400.1 | Wheat | nucleus | 50.37 | 51.31 |
| TraesCS5B01G330100.1 | Wheat | nucleus | 48.9 | 50.57 |
| AT4G09460.1 | Thale cress | nucleus | 43.75 | 50.42 |
| GSMUA_Achr9P08600_001 | Banana | nucleus | 50.37 | 50.37 |
| Solyc06g065100.2.1 | Tomato | nucleus | 49.26 | 48.03 |
| PGSC0003DMT400080427 | Potato | nucleus | 48.9 | 46.67 |
| VIT_07s0130g00040.t01 | Wine grape | nucleus | 49.26 | 46.21 |
| GSMUA_Achr6P12930_001 | Banana | nucleus | 48.16 | 45.8 |
| KRH54016 | Soybean | nucleus | 48.53 | 43.85 |
| KRH63931 | Soybean | nucleus | 48.16 | 43.38 |
| TraesCS3B01G515900.1 | Wheat | nucleus | 30.88 | 41.18 |
| TraesCS4B01G096500.1 | Wheat | nucleus, plastid | 53.31 | 38.06 |
| TraesCS4B01G323300.1 | Wheat | nucleus | 30.88 | 34.29 |
| TraesCS7B01G070400.1 | Wheat | nucleus | 31.25 | 33.46 |
| TraesCS3B01G290600.1 | Wheat | nucleus | 32.72 | 32.72 |
| TraesCS4B01G186000.1 | Wheat | nucleus | 32.35 | 25.43 |
| TraesCS1B01G005200.1 | Wheat | nucleus | 30.88 | 25.3 |
| TraesCS1B01G023400.1 | Wheat | nucleus | 29.78 | 25.23 |
| TraesCS1B01G023500.1 | Wheat | nucleus | 29.41 | 24.92 |
| TraesCS1B01G049700.1 | Wheat | nucleus | 29.04 | 24.61 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G119300.1 | EnsemblPlantsGene:TraesCS5B01G119300 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF951 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 | SUPFAM:SSF46689 |
| TIGR:cd00167 | MapMan:15.5.2.1 | : | : | : | : |
Description
No Description!
Coordinates
chr5B:+:211146030..211147069
Molecular Weight (calculated)
29217.7 Da
IEP (calculated)
8.441
GRAVY (calculated)
-0.426
Length
272 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRSPCCEKA HTNKGAWTKE EDQRLIAHIK AHGEGCWRSL PKAAGLLRCG KSCRLRWINY LRPDLKRGNF TDEEDELIIK LHEFLGNKWS LIAGRLPGRT
101: DNEIKNYWNT HVKRKLLARG VDPQTHRPLN AGTAAVQGIH TPSSPAVASG ASPHQLAGGS SCSPDASGHS SDADDSVSLP PSLAGNLGVG MIDLNLSICP
201: PCQPPLSREA DGVLRTGYSE REKICLCLNR LGLHGGEGCS CVGSSSSSSL HPASSGVLRF LDASLFRDPK VQ
101: DNEIKNYWNT HVKRKLLARG VDPQTHRPLN AGTAAVQGIH TPSSPAVASG ASPHQLAGGS SCSPDASGHS SDADDSVSLP PSLAGNLGVG MIDLNLSICP
201: PCQPPLSREA DGVLRTGYSE REKICLCLNR LGLHGGEGCS CVGSSSSSSL HPASSGVLRF LDASLFRDPK VQ
001: MGRSPCCEKA HMNKGAWTKE EDQLLVDYIR KHGEGCWRSL PRAAGLQRCG KSCRLRWMNY LRPDLKRGNF TEEEDELIIK LHSLLGNKWS LIAGRLPGRT
101: DNEIKNYWNT HIKRKLLSRG IDPNSHRLIN ESVVSPSSLQ NDVVETIHLD FSGPVKPEPV REEIGMVNNC ESSGTTSEKD YGNEEDWVLN LELSVGPSYR
201: YESTRKVSVV DSAESTRRWG SELFGAHESD AVCLCCRIGL FRNESCRNCR VSDVRTH
101: DNEIKNYWNT HIKRKLLSRG IDPNSHRLIN ESVVSPSSLQ NDVVETIHLD FSGPVKPEPV REEIGMVNNC ESSGTTSEKD YGNEEDWVLN LELSVGPSYR
201: YESTRKVSVV DSAESTRRWG SELFGAHESD AVCLCCRIGL FRNESCRNCR VSDVRTH
Arabidopsis Description
MYB3MYB3 [Source:UniProtKB/TrEMBL;Acc:A0A178WFN1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.