Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | nucleus | 70.86 | 83.22 |
| GSMUA_Achr9P24180_001 | Banana | nucleus | 70.86 | 71.68 |
| GSMUA_Achr11P... | Banana | nucleus | 68.0 | 71.26 |
| GSMUA_Achr10P... | Banana | nucleus | 78.86 | 63.59 |
| GSMUA_Achr6P07260_001 | Banana | mitochondrion | 70.86 | 62.31 |
| GSMUA_Achr8P33900_001 | Banana | nucleus | 69.71 | 60.1 |
| GSMUA_Achr1P02420_001 | Banana | nucleus | 66.86 | 60.0 |
| GSMUA_Achr5P26000_001 | Banana | nucleus | 71.43 | 59.52 |
| GSMUA_Achr8P32480_001 | Banana | nucleus | 68.0 | 59.5 |
| GSMUA_Achr3P22200_001 | Banana | nucleus | 73.14 | 58.99 |
| EES16743 | Sorghum | nucleus | 71.43 | 58.14 |
| GSMUA_Achr6P25420_001 | Banana | nucleus | 74.86 | 55.27 |
| Zm00001d041853_P001 | Maize | nucleus | 70.29 | 54.42 |
| TraesCS5A01G111300.1 | Wheat | nucleus | 75.43 | 54.1 |
| GSMUA_AchrUn_... | Banana | nucleus | 59.43 | 53.61 |
| GSMUA_Achr1P26520_001 | Banana | nucleus | 73.14 | 53.11 |
| Bra000680.1-P | Field mustard | nucleus | 67.43 | 52.68 |
| CDX90721 | Canola | nucleus | 67.43 | 52.68 |
| AT1G35515.1 | Thale cress | nucleus | 63.43 | 52.36 |
| GSMUA_Achr4P25710_001 | Banana | nucleus | 57.14 | 52.08 |
| GSMUA_Achr1P07550_001 | Banana | nucleus | 70.29 | 51.9 |
| GSMUA_Achr5P17010_001 | Banana | nucleus | 71.43 | 51.87 |
| CDY05057 | Canola | nucleus | 66.86 | 51.54 |
| TraesCS1A01G268800.1 | Wheat | nucleus | 71.43 | 50.61 |
| HORVU5Hr1G036900.1 | Barley | nucleus | 76.0 | 50.38 |
| Zm00001d012255_P001 | Maize | nucleus | 72.0 | 50.2 |
| AT4G09460.1 | Thale cress | nucleus | 67.43 | 50.0 |
| TraesCS1B01G279400.1 | Wheat | nucleus | 70.29 | 49.8 |
| GSMUA_Achr6P12930_001 | Banana | nucleus | 81.14 | 49.65 |
| HORVU1Hr1G074260.1 | Barley | nucleus | 70.86 | 49.4 |
| Zm00001d010201_P001 | Maize | nucleus | 70.29 | 49.4 |
| TraesCS1D01G268900.1 | Wheat | nucleus | 69.71 | 49.39 |
| Zm00001d038338_P001 | Maize | nucleus | 72.57 | 49.22 |
| TraesCS5B01G119300.1 | Wheat | nucleus | 76.0 | 48.9 |
| GSMUA_Achr9P08600_001 | Banana | nucleus | 75.43 | 48.53 |
| Os05t0429900-01 | Rice | nucleus | 71.43 | 48.08 |
| KXG22070 | Sorghum | nucleus | 71.43 | 47.71 |
| TraesCS3A01G384400.1 | Wheat | nucleus | 72.57 | 47.57 |
| Zm00001d042665_P001 | Maize | nucleus | 70.86 | 47.33 |
| TraesCS3D01G377300.1 | Wheat | nucleus | 73.14 | 47.23 |
| TraesCS3B01G416400.1 | Wheat | nucleus | 72.0 | 47.19 |
| GSMUA_Achr10P... | Banana | nucleus | 55.43 | 47.09 |
| HORVU3Hr1G082210.1 | Barley | nucleus | 72.57 | 47.04 |
| EES01839 | Sorghum | nucleus | 71.43 | 46.47 |
| Zm00001d004744_P001 | Maize | nucleus | 72.0 | 45.82 |
| GSMUA_Achr5P01180_001 | Banana | nucleus | 66.86 | 45.0 |
| Os01t0874300-01 | Rice | extracellular, nucleus | 73.71 | 44.95 |
| TraesCS4A01G217800.1 | Wheat | nucleus | 73.71 | 44.79 |
| TraesCS4D01G092900.1 | Wheat | nucleus | 73.71 | 44.64 |
| Solyc06g065100.2.1 | Tomato | nucleus | 70.86 | 44.44 |
| OQU78830 | Sorghum | nucleus | 70.86 | 43.97 |
| TraesCS5D01G128200.2 | Wheat | nucleus | 76.57 | 43.79 |
| PGSC0003DMT400080427 | Potato | nucleus | 70.86 | 43.51 |
| GSMUA_Achr6P09620_001 | Banana | nucleus | 49.71 | 43.5 |
| VIT_07s0130g00040.t01 | Wine grape | nucleus | 72.0 | 43.45 |
| Zm00001d053060_P001 | Maize | nucleus | 70.86 | 43.06 |
| Os11t0180900-00 | Rice | nucleus | 72.57 | 43.05 |
| GSMUA_Achr10P... | Banana | nucleus | 69.14 | 42.61 |
| KRH63931 | Soybean | nucleus | 73.14 | 42.38 |
| KRH54016 | Soybean | nucleus | 72.57 | 42.19 |
| OQU83016 | Sorghum | nucleus | 73.71 | 40.95 |
| GSMUA_Achr3P21000_001 | Banana | nucleus | 59.43 | 40.94 |
| GSMUA_Achr3P07950_001 | Banana | nucleus | 49.14 | 36.13 |
| HORVU4Hr1G018360.2 | Barley | nucleus | 72.57 | 34.79 |
| TraesCS4B01G096500.1 | Wheat | nucleus, plastid | 73.71 | 33.86 |
| GSMUA_Achr9P27380_001 | Banana | nucleus | 49.14 | 33.08 |
| GSMUA_Achr3P27700_001 | Banana | nucleus | 51.43 | 32.85 |
| GSMUA_Achr2P19380_001 | Banana | nucleus | 45.71 | 32.79 |
| GSMUA_Achr11P... | Banana | nucleus | 44.0 | 32.77 |
| GSMUA_Achr6P04400_001 | Banana | nucleus | 50.29 | 32.0 |
| GSMUA_Achr9P16040_001 | Banana | nucleus | 46.86 | 31.91 |
| GSMUA_Achr8P14540_001 | Banana | nucleus | 46.86 | 31.54 |
| GSMUA_Achr7P18560_001 | Banana | nucleus | 48.0 | 31.23 |
| GSMUA_Achr7P18550_001 | Banana | nucleus | 46.86 | 31.06 |
| GSMUA_Achr4P21700_001 | Banana | nucleus | 41.14 | 31.03 |
| GSMUA_Achr2P17960_001 | Banana | nucleus | 45.71 | 31.01 |
| GSMUA_Achr10P... | Banana | nucleus | 49.14 | 30.94 |
| GSMUA_Achr3P07940_001 | Banana | nucleus | 48.0 | 29.79 |
| GSMUA_Achr6P14840_001 | Banana | nucleus | 48.57 | 29.31 |
| GSMUA_Achr8P22690_001 | Banana | nucleus | 48.57 | 29.31 |
| GSMUA_Achr10P... | Banana | nucleus | 49.71 | 29.19 |
| GSMUA_AchrUn_... | Banana | nucleus | 53.14 | 29.06 |
| GSMUA_Achr5P21250_001 | Banana | nucleus | 51.43 | 28.04 |
| GSMUA_Achr7P13700_001 | Banana | nucleus | 49.14 | 28.01 |
| GSMUA_Achr8P10470_001 | Banana | nucleus | 53.14 | 25.07 |
| GSMUA_Achr5P06530_001 | Banana | nucleus | 52.57 | 24.53 |
| GSMUA_Achr6P02530_001 | Banana | nucleus | 48.0 | 23.27 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr2P20600_001 | EnsemblPlants:GSMUA_Achr2T20600_001 | EnsemblPlantsGene:GSMUA_Achr2G20600_001 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF741 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI00029629FC | UniProt:M0S9Q1 | MapMan:15.5.2.1 | : | : |
Description
Transcription repressor MYB4 [Source:GMGC_GENE;Acc:GSMUA_Achr2G20600_001]
Coordinates
chr2:+:20400441..20401352
Molecular Weight (calculated)
19744.4 Da
IEP (calculated)
9.022
GRAVY (calculated)
-0.851
Length
175 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRSPCCEKA HTNKGAWTKE EDEKLISYIK AHGEGCWRSL PKAAGLLRCG KSCRLRWINY LRPDLKRGNF TAEEDELIIE LHGLLGNKWS LIAGRLPGRT
101: DNEIKNYWNT HIKRKLLGRG LDPQTHRPIT ALKQEERSMA QDSSGDSSSR DGDGGLDLNL DLSISLPRHS SPEQR
101: DNEIKNYWNT HIKRKLLGRG LDPQTHRPIT ALKQEERSMA QDSSGDSSSR DGDGGLDLNL DLSISLPRHS SPEQR
001: MGRSPCCEKA HMNKGAWTKE EDQLLVDYIR KHGEGCWRSL PRAAGLQRCG KSCRLRWMNY LRPDLKRGNF TEEEDELIIK LHSLLGNKWS LIAGRLPGRT
101: DNEIKNYWNT HIKRKLLSRG IDPNSHRLIN ESVVSPSSLQ NDVVETIHLD FSGPVKPEPV REEIGMVNNC ESSGTTSEKD YGNEEDWVLN LELSVGPSYR
201: YESTRKVSVV DSAESTRRWG SELFGAHESD AVCLCCRIGL FRNESCRNCR VSDVRTH
101: DNEIKNYWNT HIKRKLLSRG IDPNSHRLIN ESVVSPSSLQ NDVVETIHLD FSGPVKPEPV REEIGMVNNC ESSGTTSEKD YGNEEDWVLN LELSVGPSYR
201: YESTRKVSVV DSAESTRRWG SELFGAHESD AVCLCCRIGL FRNESCRNCR VSDVRTH
Arabidopsis Description
MYB3MYB3 [Source:UniProtKB/TrEMBL;Acc:A0A178WFN1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.