Skip to main content
crop-pal logo
Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3B01G416400.1 Wheat nucleus 97.42 98.88
TraesCS3A01G384400.1 Wheat nucleus 96.31 97.75
HORVU3Hr1G082210.1 Barley nucleus 95.94 96.3
Zm00001d012255_P001 Maize nucleus 75.65 81.67
GSMUA_AchrUn_... Banana nucleus 43.17 78.52
EES01839 Sorghum nucleus 77.86 78.44
Os01t0874300-01 Rice extracellular, nucleus 81.92 77.35
Zm00001d042665_P001 Maize nucleus 74.17 76.72
GSMUA_Achr3P22200_001 Banana nucleus 60.15 75.12
GSMUA_Achr2P20600_001 Banana nucleus 47.23 73.14
TraesCS1D01G268900.1 Wheat nucleus 61.99 68.02
GSMUA_Achr5P26000_001 Banana nucleus 49.82 64.29
GSMUA_Achr6P25420_001 Banana nucleus 55.72 63.71
GSMUA_Achr6P07260_001 Banana mitochondrion 46.13 62.81
GSMUA_Achr10P... Banana nucleus 50.18 62.67
GSMUA_Achr8P32480_001 Banana nucleus 43.54 59.0
TraesCS7D01G272400.1 Wheat nucleus 50.92 58.97
GSMUA_Achr5P17010_001 Banana nucleus 52.4 58.92
AT1G35515.1 Thale cress nucleus 44.28 56.6
GSMUA_Achr9P08600_001 Banana nucleus 54.61 54.41
CDX90721 Canola nucleus 43.91 53.12
Bra000680.1-P Field mustard nucleus 43.91 53.12
CDY05057 Canola nucleus 43.54 51.98
TraesCS5D01G335700.1 Wheat nucleus 50.92 51.88
AT4G09460.1 Thale cress nucleus 45.02 51.69
TraesCS4D01G092900.1 Wheat nucleus 53.51 50.17
Solyc06g065100.2.1 Tomato nucleus 50.18 48.75
GSMUA_Achr6P12930_001 Banana nucleus 50.92 48.25
KRH54016 Soybean nucleus 53.14 47.84
PGSC0003DMT400080427 Potato nucleus 50.18 47.72
VIT_07s0130g00040.t01 Wine grape nucleus 50.18 46.9
KRH63931 Soybean nucleus 52.03 46.69
TraesCS5D01G128200.2 Wheat nucleus 51.66 45.75
TraesCS4D01G319800.1 Wheat nucleus 29.89 36.16
TraesCS3D01G257800.1 Wheat nucleus 34.32 34.32
TraesCS7D01G166500.1 Wheat nucleus 31.73 34.13
TraesCS3D01G468400.1 Wheat nucleus 33.21 33.96
TraesCS4D01G319700.1 Wheat nucleus 30.26 33.74
TraesCS4D01G224500.1 Wheat nucleus 28.04 32.9
TraesCS1D01G021700.1 Wheat nucleus 33.95 29.3
TraesCS4D01G187100.1 Wheat nucleus 33.95 26.59
TraesCS1D01G020900.1 Wheat nucleus 31.73 25.37
Protein Annotations
EnsemblPlants:TraesCS3D01G377300.1EnsemblPlantsGene:TraesCS3D01G377300Gene3D:1.10.10.60GO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0005488InterPro:Homeobox-like_sfInterPro:IPR017930InterPro:Myb_domInterPro:SANT/MybPANTHER:PTHR10641
PANTHER:PTHR10641:SF617PFAM:PF00249PFscan:PS51294SEG:segSMART:SM00717SUPFAM:SSF46689
TIGR:cd00167MapMan:15.5.2.1::::
Description
No Description!
Coordinates
chr3D:+:492131279..492132558
Molecular Weight (calculated)
29507.0 Da
IEP (calculated)
8.902
GRAVY (calculated)
-0.542
Length
271 amino acids
Sequence
(BLAST)
001: MGRSPCCEKA HTNKGAWTKE EDQRLIGYIK AHGEGCWRSL PKAAGLLRCG KSCRLRWMNY LRPDLKRGNF TDDDDELIIK LHALLGNKWS LIAGQLPGRT
101: DNEIKNYWNT HIKRKLLNRG MDPHTHRPIS AAAAASGLTT STAAPVFPSS PAPASRLANA PFASFQSSTV SFARPSPSDD GHSSSGGSSD APRCPDLNLD
201: LDLDLSMSLP CSPPKTAPPA KSTPTSHQQQ GICLCYHLGV RNGEACTCKT ASPADPRVFR FLRPLEEGQY I
Best Arabidopsis Sequence Match ( AT4G09460.1 )
(BLAST)
001: MGRSPCCEKA HTNKGAWTKE EDQRLVDYIR NHGEGCWRSL PKSAGLLRCG KSCRLRWINY LRPDLKRGNF TDDEDQIIIK LHSLLGNKWS LIAGRLPGRT
101: DNEIKNYWNT HIKRKLLSHG IDPQTHRQIN ESKTVSSQVV VPIQNDAVEY SFSNLAVKPK TENSSDNGAS TSGTTTDEDL RQNGECYYSD NSGHIKLNLD
201: LTLGFGSWSG RIVGVGSSAD SKPWCDPVME ARLSLL
Arabidopsis Description
MYB6Transcription repressor MYB6 [Source:UniProtKB/Swiss-Prot;Acc:Q38851]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.