Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES01839 | Sorghum | nucleus | 88.55 | 86.25 |
| Zm00001d012255_P001 | Maize | nucleus | 79.39 | 82.87 |
| GSMUA_AchrUn_... | Banana | nucleus | 45.42 | 79.87 |
| Os01t0874300-01 | Rice | extracellular, nucleus | 82.44 | 75.26 |
| GSMUA_Achr3P22200_001 | Banana | nucleus | 62.21 | 75.12 |
| TraesCS3B01G416400.1 | Wheat | nucleus | 76.34 | 74.91 |
| TraesCS3A01G384400.1 | Wheat | nucleus | 76.34 | 74.91 |
| TraesCS3D01G377300.1 | Wheat | nucleus | 76.72 | 74.17 |
| HORVU3Hr1G082210.1 | Barley | nucleus | 75.95 | 73.7 |
| GSMUA_Achr2P20600_001 | Banana | nucleus | 47.33 | 70.86 |
| Zm00001d038338_P001 | Maize | nucleus | 65.65 | 66.67 |
| GSMUA_Achr5P26000_001 | Banana | nucleus | 53.05 | 66.19 |
| GSMUA_Achr6P07260_001 | Banana | mitochondrion | 48.09 | 63.32 |
| GSMUA_Achr6P25420_001 | Banana | nucleus | 56.87 | 62.87 |
| Zm00001d022628_P001 | Maize | nucleus | 51.91 | 62.39 |
| GSMUA_Achr8P32480_001 | Banana | nucleus | 45.8 | 60.0 |
| GSMUA_Achr10P... | Banana | nucleus | 49.62 | 59.91 |
| GSMUA_Achr5P17010_001 | Banana | nucleus | 54.96 | 59.75 |
| Zm00001d010201_P001 | Maize | nucleus | 56.11 | 59.04 |
| AT1G35515.1 | Thale cress | nucleus | 46.95 | 58.02 |
| Zm00001d041853_P001 | Maize | nucleus | 49.62 | 57.52 |
| CDX90721 | Canola | nucleus | 47.33 | 55.36 |
| Bra000680.1-P | Field mustard | nucleus | 47.33 | 55.36 |
| Zm00001d032024_P001 | Maize | nucleus | 53.05 | 54.72 |
| AT4G09460.1 | Thale cress | nucleus | 49.24 | 54.66 |
| CDY05057 | Canola | nucleus | 46.95 | 54.19 |
| GSMUA_Achr9P08600_001 | Banana | nucleus | 56.11 | 54.04 |
| Zm00001d053220_P001 | Maize | nucleus | 52.29 | 52.69 |
| Solyc06g065100.2.1 | Tomato | nucleus | 54.58 | 51.25 |
| Zm00001d004744_P001 | Maize | nucleus | 53.05 | 50.55 |
| PGSC0003DMT400080427 | Potato | nucleus | 54.2 | 49.82 |
| Zm00001d006236_P002 | Maize | nucleus | 51.91 | 49.82 |
| VIT_07s0130g00040.t01 | Wine grape | nucleus | 53.05 | 47.93 |
| Zm00001d053060_P001 | Maize | nucleus | 52.67 | 47.92 |
| GSMUA_Achr6P12930_001 | Banana | nucleus | 51.15 | 46.85 |
| KRH54016 | Soybean | nucleus | 53.82 | 46.84 |
| KRH63931 | Soybean | nucleus | 53.82 | 46.69 |
| Zm00001d011645_P001 | Maize | nucleus | 33.59 | 38.26 |
| Zm00001d044975_P001 | Maize | nucleus | 34.35 | 33.09 |
| Zm00001d037118_P001 | Maize | nucleus | 32.06 | 30.77 |
| Zm00001d028842_P001 | Maize | nucleus | 35.5 | 27.76 |
| Zm00001d047671_P001 | Maize | nucleus | 35.5 | 27.03 |
| Zm00001d040621_P002 | Maize | nucleus | 34.73 | 25.71 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100193234 | MapMan:15.5.2.1 | UniProt:B4FEA9 | EMBL:BT035447 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom |
| ProteinID:ONM36009.1 | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF617 | InterPro:SANT/Myb |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI00017B686F | EnsemblPlantsGene:Zm00001d042665 | EnsemblPlants:Zm00001d042665_P001 | EnsemblPlants:Zm00001d042665_T001 |
| SEG:seg | : | : | : | : | : |
Description
MYB-transcription factor 32Transcription repressor MYB6
Coordinates
chr3:-:175964663..175965738
Molecular Weight (calculated)
28313.7 Da
IEP (calculated)
9.565
GRAVY (calculated)
-0.531
Length
262 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRSPCCEKA HTNKGAWTKE EDQRLIAYIR AHGEGSWRSL PKAAGLLRCG KSCRLRWMNY LRPDLKRGNF TGDDDELIIK LHALLGNKWS LIAGQLPGRT
101: DNEIKNYWNT HIKRKLLSRG IDPQTHRPLS GGAGSALTTT SSTAGFPSPA PASRPTPTPP PAVVVPPNAI FARPAPSEDG HSSSGASTDA PRCPDLNLDL
201: DLSVGPPPKT PAATPASQQR RRTTICLCYH LGVRGGEACS CETASSLAGF RFLRPLEEGQ YI
101: DNEIKNYWNT HIKRKLLSRG IDPQTHRPLS GGAGSALTTT SSTAGFPSPA PASRPTPTPP PAVVVPPNAI FARPAPSEDG HSSSGASTDA PRCPDLNLDL
201: DLSVGPPPKT PAATPASQQR RRTTICLCYH LGVRGGEACS CETASSLAGF RFLRPLEEGQ YI
001: MGRSPCCEKA HTNKGAWTKE EDQRLVDYIR NHGEGCWRSL PKSAGLLRCG KSCRLRWINY LRPDLKRGNF TDDEDQIIIK LHSLLGNKWS LIAGRLPGRT
101: DNEIKNYWNT HIKRKLLSHG IDPQTHRQIN ESKTVSSQVV VPIQNDAVEY SFSNLAVKPK TENSSDNGAS TSGTTTDEDL RQNGECYYSD NSGHIKLNLD
201: LTLGFGSWSG RIVGVGSSAD SKPWCDPVME ARLSLL
101: DNEIKNYWNT HIKRKLLSHG IDPQTHRQIN ESKTVSSQVV VPIQNDAVEY SFSNLAVKPK TENSSDNGAS TSGTTTDEDL RQNGECYYSD NSGHIKLNLD
201: LTLGFGSWSG RIVGVGSSAD SKPWCDPVME ARLSLL
Arabidopsis Description
MYB6Transcription repressor MYB6 [Source:UniProtKB/Swiss-Prot;Acc:Q38851]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.