Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d019170_P001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G38620.1 | Zm00001d019170_P001 | AT4G09820.1 | 15361138 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os09t0538400-01 | Rice | extracellular | 90.37 | 78.49 |
| EER99264 | Sorghum | nucleus | 94.95 | 78.41 |
| TraesCS5B01G330100.1 | Wheat | nucleus | 88.07 | 73.0 |
| Zm00001d006236_P002 | Maize | nucleus | 91.28 | 72.89 |
| KRH60702 | Soybean | nucleus | 70.18 | 72.86 |
| TraesCS5D01G335700.1 | Wheat | nucleus | 87.16 | 71.43 |
| TraesCS5A01G329900.1 | Wheat | nucleus | 87.16 | 70.9 |
| HORVU5Hr1G083910.2 | Barley | nucleus | 87.16 | 70.63 |
| VIT_03s0038g02310.t01 | Wine grape | nucleus | 76.15 | 66.14 |
| KRH51400 | Soybean | nucleus | 71.1 | 65.96 |
| Zm00001d032024_P001 | Maize | nucleus | 76.15 | 65.35 |
| KRH29280 | Soybean | nucleus | 73.39 | 65.04 |
| KRH24301 | Soybean | nucleus | 73.85 | 63.64 |
| Solyc01g111500.2.1 | Tomato | nucleus | 73.39 | 63.49 |
| Zm00001d053220_P001 | Maize | nucleus | 75.23 | 63.08 |
| PGSC0003DMT400015803 | Potato | nucleus | 72.94 | 62.6 |
| PGSC0003DMT400034372 | Potato | nucleus | 72.94 | 59.33 |
| Solyc10g055410.1.1 | Tomato | nucleus | 73.85 | 58.97 |
| AT4G38620.1 | Thale cress | nucleus | 72.48 | 56.03 |
| Zm00001d012255_P001 | Maize | nucleus | 63.3 | 54.98 |
| CDX90285 | Canola | nucleus | 71.1 | 54.77 |
| Bra010736.1-P | Field mustard | nucleus | 71.1 | 54.77 |
| Zm00001d041853_P001 | Maize | nucleus | 56.42 | 54.42 |
| CDX72743 | Canola | nucleus | 72.02 | 53.4 |
| CDY22416 | Canola | nucleus | 71.56 | 53.06 |
| Bra033572.1-P | Field mustard | nucleus | 71.56 | 53.06 |
| Zm00001d038338_P001 | Maize | nucleus | 62.39 | 52.71 |
| Zm00001d042665_P001 | Maize | nucleus | 62.39 | 51.91 |
| Zm00001d010201_P001 | Maize | nucleus | 59.17 | 51.81 |
| CDY52797 | Canola | nucleus | 61.01 | 51.55 |
| CDY12092 | Canola | nucleus | 71.1 | 50.99 |
| Zm00001d004744_P001 | Maize | nucleus | 61.93 | 49.09 |
| Zm00001d053060_P001 | Maize | nucleus | 63.3 | 47.92 |
| Zm00001d011645_P001 | Maize | nucleus | 36.7 | 34.78 |
| Zm00001d044975_P001 | Maize | nucleus | 39.45 | 31.62 |
| Zm00001d037118_P001 | Maize | nucleus | 38.99 | 31.14 |
| Zm00001d040621_P002 | Maize | nucleus | 42.66 | 26.27 |
| Zm00001d028842_P001 | Maize | nucleus | 39.45 | 25.67 |
| Zm00001d047671_P001 | Maize | nucleus | 40.37 | 25.58 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EntrezGene:541744 | UniProt:A0A060CX05 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | EMBL:KJ727530 | InterPro:Myb_dom |
| ProteinID:ONM61296.1 | ProteinID:ONM61297.1 | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF741 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI00005B0D7F | EnsemblPlantsGene:Zm00001d022628 | EnsemblPlants:Zm00001d022628_P001 |
| EnsemblPlants:Zm00001d022628_T001 | : | : | : | : | : |
Description
MYB-transcription factor 11R2R3MYB-domain protein
Coordinates
chr7:+:181720257..181728090
Molecular Weight (calculated)
24881.1 Da
IEP (calculated)
8.557
GRAVY (calculated)
-0.557
Length
218 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRSPCCEKA HTNKGAWTKE EDDRLVAYIK AHGEGCWRSL PKAAGLVRCG KSCRLRWINY LRPDLKRGNF TEEEDELIIK LHSLLGNKWS LIAGRLPGRT
101: DNEIKNYWNT HIRRKLLSRG IDPVTHRPIN EHTSNITISF EDWGQGKALK CPDLNLDLCI SPPCQEEEEA MLLRPVKREE AGLCFSCSLG LPKSADCKCS
201: NFLGLRTAML DFRRLEMK
101: DNEIKNYWNT HIRRKLLSRG IDPVTHRPIN EHTSNITISF EDWGQGKALK CPDLNLDLCI SPPCQEEEEA MLLRPVKREE AGLCFSCSLG LPKSADCKCS
201: NFLGLRTAML DFRRLEMK
001: MGRSPCCEKD HTNKGAWTKE EDDKLISYIK AHGEGCWRSL PRSAGLQRCG KSCRLRWINY LRPDLKRGNF TLEEDDLIIK LHSLLGNKWS LIATRLPGRT
101: DNEIKNYWNT HVKRKLLRKG IDPATHRPIN ETKTSQDSSD SSKTEDPLVK ILSFGPQLEK IANFGDERIQ KRVEYSVVEE RCLDLNLELR ISPPWQDKLH
201: DERNLRFGRV KYRCSACRFG FGNGKECSCN NVKCQTEDSS SSSYSSTDIS SSIGYDFLGL NNTRVLDFST LEMK
101: DNEIKNYWNT HVKRKLLRKG IDPATHRPIN ETKTSQDSSD SSKTEDPLVK ILSFGPQLEK IANFGDERIQ KRVEYSVVEE RCLDLNLELR ISPPWQDKLH
201: DERNLRFGRV KYRCSACRFG FGNGKECSCN NVKCQTEDSS SSSYSSTDIS SSIGYDFLGL NNTRVLDFST LEMK
Arabidopsis Description
MYB32Transcription factor MYB32 [Source:UniProtKB/Swiss-Prot;Acc:O49608]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.