Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90285 | Canola | nucleus | 85.46 | 85.16 |
| Bra010736.1-P | Field mustard | nucleus | 85.11 | 84.81 |
| CDY52797 | Canola | nucleus | 73.76 | 80.62 |
| CDY12092 | Canola | nucleus | 85.46 | 79.28 |
| GSMUA_Achr11P... | Banana | nucleus | 44.68 | 75.45 |
| GSMUA_Achr9P24180_001 | Banana | nucleus | 45.39 | 73.99 |
| Zm00001d022628_P001 | Maize | nucleus | 56.03 | 72.48 |
| GSMUA_Achr8P33900_001 | Banana | nucleus | 52.13 | 72.41 |
| GSMUA_Achr1P02420_001 | Banana | nucleus | 49.65 | 71.79 |
| KRH60702 | Soybean | nucleus | 52.84 | 70.95 |
| VIT_04s0023g03710.t01 | Wine grape | nucleus | 56.38 | 65.7 |
| KRH51400 | Soybean | nucleus | 53.9 | 64.68 |
| Os09t0538400-01 | Rice | extracellular | 57.45 | 64.54 |
| KRH29280 | Soybean | nucleus | 56.03 | 64.23 |
| Solyc01g111500.2.1 | Tomato | nucleus | 56.38 | 63.1 |
| GSMUA_Achr1P07550_001 | Banana | nucleus | 52.48 | 62.45 |
| TraesCS7D01G272400.1 | Wheat | nucleus | 51.77 | 62.39 |
| PGSC0003DMT400015803 | Potato | nucleus | 56.03 | 62.2 |
| TraesCS7B01G169900.1 | Wheat | nucleus | 51.77 | 62.13 |
| KRH24301 | Soybean | nucleus | 55.67 | 62.06 |
| EER99264 | Sorghum | nucleus | 57.8 | 61.74 |
| HORVU7Hr1G057410.1 | Barley | nucleus | 51.77 | 61.34 |
| GSMUA_Achr1P26520_001 | Banana | nucleus | 52.13 | 61.0 |
| PGSC0003DMT400034372 | Potato | nucleus | 57.8 | 60.82 |
| Solyc10g055410.1.1 | Tomato | nucleus | 58.51 | 60.44 |
| TraesCS7A01G272100.1 | Wheat | nucleus | 51.42 | 60.42 |
| AT2G16720.1 | Thale cress | nucleus | 57.09 | 59.85 |
| TraesCS5B01G330100.1 | Wheat | nucleus | 54.96 | 58.94 |
| TraesCS5D01G335700.1 | Wheat | nucleus | 55.32 | 58.65 |
| TraesCS5A01G329900.1 | Wheat | nucleus | 55.32 | 58.21 |
| EES14116 | Sorghum | nucleus | 53.19 | 58.14 |
| Zm00001d006236_P002 | Maize | nucleus | 56.03 | 57.88 |
| HORVU5Hr1G083910.2 | Barley | nucleus | 54.96 | 57.62 |
| Zm00001d032024_P001 | Maize | nucleus | 51.77 | 57.48 |
| AT4G34990.1 | Thale cress | nucleus | 55.32 | 56.93 |
| Zm00001d053220_P001 | Maize | nucleus | 51.77 | 56.15 |
| AT1G35515.1 | Thale cress | nucleus | 41.49 | 55.19 |
| GSMUA_Achr4P25710_001 | Banana | nucleus | 36.88 | 54.17 |
| AT4G09460.1 | Thale cress | nucleus | 44.33 | 52.97 |
| AT1G22640.1 | Thale cress | nucleus | 47.87 | 52.53 |
| AT5G14750.1 | Thale cress | nucleus | 27.3 | 37.93 |
| AT5G52600.1 | Thale cress | nucleus | 26.6 | 37.31 |
| AT3G13540.1 | Thale cress | nucleus | 32.27 | 36.55 |
| AT5G40330.1 | Thale cress | nucleus | 25.18 | 32.42 |
| AT3G27920.1 | Thale cress | nucleus | 25.89 | 32.02 |
| AT5G35550.2 | Thale cress | nucleus | 28.01 | 30.27 |
| AT3G62610.1 | Thale cress | nucleus | 32.62 | 26.82 |
| AT5G49330.1 | Thale cress | nucleus | 32.27 | 26.61 |
| AT2G47460.1 | Thale cress | nucleus | 34.75 | 26.42 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EntrezGene:830018 | ProteinID:AEE86955.1 | EMBL:AF062860 | ArrayExpress:AT4G38620 |
| EnsemblPlantsGene:AT4G38620 | RefSeq:AT4G38620 | TAIR:AT4G38620 | RefSeq:AT4G38620-TAIR-G | EnsemblPlants:AT4G38620.1 | TAIR:AT4G38620.1 |
| Symbol:ATMYB4 | EMBL:AY070100 | EMBL:AY123004 | EMBL:AY140037 | EMBL:AY519615 | EMBL:BT006302 |
| ProteinID:CAB37518.1 | ProteinID:CAB80526.1 | GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006357 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009628 | GO:GO:0009719 | GO:GO:0009751 |
| GO:GO:0009753 | GO:GO:0009987 | GO:GO:0010224 | GO:GO:0019748 | GO:GO:0030154 | GO:GO:0043565 |
| GO:GO:0044212 | GO:GO:0045892 | GO:GO:1903086 | GO:GO:2000762 | InterPro:Homeobox-like_sf | InterPro:IPR017930 |
| InterPro:Myb_dom | RefSeq:NP_195574.1 | PFAM:PF00249 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF741 |
| UniProt:Q9SZP1 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI00000A466E | EMBL:Z95763 |
Description
MYB4Transcription repressor MYB4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZP1]
Coordinates
chr4:+:18053360..18055040
Molecular Weight (calculated)
31810.1 Da
IEP (calculated)
8.760
GRAVY (calculated)
-0.653
Length
282 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRSPCCEKA HTNKGAWTKE EDERLVAYIK AHGEGCWRSL PKAAGLLRCG KSCRLRWINY LRPDLKRGNF TEEEDELIIK LHSLLGNKWS LIAGRLPGRT
101: DNEIKNYWNT HIRRKLINRG IDPTSHRPIQ ESSASQDSKP TQLEPVTSNT INISFTSAPK VETFHESISF PGKSEKISML TFKEEKDECP VQEKFPDLNL
201: ELRISLPDDV DRLQGHGKST TPRCFKCSLG MINGMECRCG RMRCDVVGGS SKGSDMSNGF DFLGLAKKET TSLLGFRSLE MK
101: DNEIKNYWNT HIRRKLINRG IDPTSHRPIQ ESSASQDSKP TQLEPVTSNT INISFTSAPK VETFHESISF PGKSEKISML TFKEEKDECP VQEKFPDLNL
201: ELRISLPDDV DRLQGHGKST TPRCFKCSLG MINGMECRCG RMRCDVVGGS SKGSDMSNGF DFLGLAKKET TSLLGFRSLE MK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.