Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G47460.1 | Thale cress | nucleus | 51.31 | 47.44 |
| AT1G35515.1 | Thale cress | nucleus | 26.24 | 42.45 |
| CDX95725 | Canola | nucleus | 41.69 | 40.51 |
| CDX83327 | Canola | nucleus | 41.11 | 40.06 |
| TraesCS1D01G021700.1 | Wheat | nucleus | 36.15 | 39.49 |
| AT4G09460.1 | Thale cress | nucleus | 26.82 | 38.98 |
| Os01t0305900-01 | Rice | nucleus | 35.28 | 38.17 |
| GSMUA_AchrUn_... | Banana | nucleus | 35.57 | 38.12 |
| Bra000453.1-P | Field mustard | nucleus | 41.4 | 37.77 |
| GSMUA_Achr8P10470_001 | Banana | nucleus | 39.94 | 36.93 |
| TraesCS4A01G118400.1 | Wheat | nucleus | 37.03 | 36.71 |
| AT5G49330.1 | Thale cress | nucleus | 36.44 | 36.55 |
| HORVU4Hr1G054420.3 | Barley | nucleus | 36.15 | 36.47 |
| TraesCS1B01G023400.1 | Wheat | nucleus | 34.11 | 36.45 |
| Zm00001d028842_P001 | Maize | nucleus | 35.57 | 36.42 |
| TraesCS4B01G186000.1 | Wheat | nucleus | 36.73 | 36.42 |
| TraesCS1B01G049700.1 | Wheat | nucleus | 33.82 | 36.14 |
| TraesCS4D01G187100.1 | Wheat | nucleus | 36.44 | 36.13 |
| TraesCS1B01G023500.1 | Wheat | nucleus | 33.53 | 35.83 |
| Zm00001d047671_P001 | Maize | nucleus | 35.86 | 35.76 |
| TraesCS1B01G005200.1 | Wheat | nucleus | 34.4 | 35.54 |
| Zm00001d040621_P002 | Maize | nucleus | 36.15 | 35.03 |
| KRH11988 | Soybean | nucleus | 33.53 | 34.85 |
| OQU86782 | Sorghum | nucleus | 36.15 | 34.35 |
| EER92385 | Sorghum | nucleus | 35.57 | 34.27 |
| KRH37017 | Soybean | nucleus | 33.24 | 34.13 |
| AT1G22640.1 | Thale cress | nucleus | 25.36 | 33.85 |
| AT2G16720.1 | Thale cress | nucleus | 26.53 | 33.83 |
| AT4G34990.1 | Thale cress | nucleus | 26.82 | 33.58 |
| AT5G14750.1 | Thale cress | nucleus | 19.83 | 33.5 |
| GSMUA_Achr5P21250_001 | Banana | nucleus | 31.2 | 33.33 |
| AT5G52600.1 | Thale cress | nucleus | 19.53 | 33.33 |
| TraesCS1A01G021500.1 | Wheat | nucleus | 32.65 | 33.23 |
| KRH50769 | Soybean | nucleus | 32.07 | 32.64 |
| AT4G38620.1 | Thale cress | nucleus | 26.82 | 32.62 |
| TraesCS1D01G020900.1 | Wheat | nucleus | 32.07 | 32.45 |
| AT3G13540.1 | Thale cress | nucleus | 23.32 | 32.13 |
| KRH02323 | Soybean | nucleus | 31.78 | 31.14 |
| AT5G40330.1 | Thale cress | nucleus | 19.53 | 30.59 |
| VIT_05s0077g01360.t01 | Wine grape | nucleus | 33.53 | 30.03 |
| AT3G27920.1 | Thale cress | nucleus | 18.95 | 28.51 |
| AT5G35550.2 | Thale cress | nucleus | 18.66 | 24.52 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EntrezGene:825435 | ProteinID:AEE80369.1 | EMBL:AF062863 | ArrayExpress:AT3G62610 |
| EnsemblPlantsGene:AT3G62610 | RefSeq:AT3G62610 | TAIR:AT3G62610 | RefSeq:AT3G62610-TAIR-G | EnsemblPlants:AT3G62610.1 | TAIR:AT3G62610.1 |
| Symbol:ATMYB11 | EMBL:AY519602 | Unigene:At.47205 | ProteinID:CAB83111.1 | GO:GO:0000981 | GO:GO:0001135 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0006357 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008285 | GO:GO:0009058 |
| GO:GO:0009416 | GO:GO:0009628 | GO:GO:0009987 | GO:GO:0010224 | GO:GO:0030154 | GO:GO:0040007 |
| GO:GO:0043565 | GO:GO:0044212 | GO:GO:0045893 | GO:GO:0048640 | GO:GO:0051555 | GO:GO:1900386 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | RefSeq:NP_191820.1 | PFAM:PF00249 | PO:PO:0000293 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009052 | PO:PO:0025022 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF203 |
| UniProt:Q9LZK4 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI00000AAA7B | : |
Description
MYB11Transcription factor MYB11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZK4]
Coordinates
chr3:+:23154630..23156585
Molecular Weight (calculated)
38315.5 Da
IEP (calculated)
4.922
GRAVY (calculated)
-0.797
Length
343 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRAPCCEKV GIKKGRWTAE EDRTLSDYIQ SNGEGSWRSL PKNAGLKRCG KSCRLRWINY LRSDIKRGNI TPEEEDVIVK LHSTLGTRWS TIASNLPGRT
101: DNEIKNYWNS HLSRKLHGYF RKPTVANTVE NAPPPPKRRP GRTSRSAMKP KFILNPKNHK TPNSFKANKS DIVLPTTTIE NGEGDKEDAL MVLSSSSLSG
201: AEEPGLGPCG YGDDGDCNPS INGDDGALCL NDDIFDSCFL LDDSHAVHVS SCESNNVKNS EPYGGMSVGH KNIETMADDF VDWDFVWREG QTLWDEKEDL
301: DSVLSRLLDG EEMESEIRQR DSNDFGEPLD IDEENKMAAW LLS
101: DNEIKNYWNS HLSRKLHGYF RKPTVANTVE NAPPPPKRRP GRTSRSAMKP KFILNPKNHK TPNSFKANKS DIVLPTTTIE NGEGDKEDAL MVLSSSSLSG
201: AEEPGLGPCG YGDDGDCNPS INGDDGALCL NDDIFDSCFL LDDSHAVHVS SCESNNVKNS EPYGGMSVGH KNIETMADDF VDWDFVWREG QTLWDEKEDL
301: DSVLSRLLDG EEMESEIRQR DSNDFGEPLD IDEENKMAAW LLS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.