Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG94424 | Soybean | nucleus | 19.41 | 78.26 |
| GSMUA_AchrUn_... | Banana | nucleus | 23.99 | 59.73 |
| GSMUA_AchrUn_... | Banana | nucleus | 51.48 | 59.69 |
| GSMUA_Achr11P... | Banana | nucleus | 24.26 | 53.89 |
| GSMUA_Achr2P20600_001 | Banana | nucleus | 25.07 | 53.14 |
| GSMUA_Achr9P24180_001 | Banana | nucleus | 24.26 | 52.02 |
| GSMUA_Achr6P07260_001 | Banana | mitochondrion | 24.26 | 45.23 |
| GSMUA_Achr1P02420_001 | Banana | nucleus | 23.72 | 45.13 |
| Os01t0305900-01 | Rice | nucleus | 38.27 | 44.8 |
| GSMUA_Achr8P33900_001 | Banana | nucleus | 24.26 | 44.34 |
| GSMUA_Achr8P32480_001 | Banana | nucleus | 23.45 | 43.5 |
| GSMUA_AchrUn_... | Banana | nucleus | 22.64 | 43.3 |
| HORVU4Hr1G054420.3 | Barley | nucleus | 39.62 | 43.24 |
| GSMUA_Achr4P25710_001 | Banana | nucleus | 22.37 | 43.23 |
| GSMUA_Achr10P... | Banana | nucleus | 25.07 | 42.86 |
| VIT_07s0005g01210.t01 | Wine grape | nucleus | 42.05 | 42.51 |
| TraesCS4A01G118400.1 | Wheat | nucleus | 39.62 | 42.49 |
| TraesCS4B01G186000.1 | Wheat | nucleus | 39.62 | 42.49 |
| GSMUA_Achr3P22200_001 | Banana | nucleus | 24.8 | 42.4 |
| Zm00001d047671_P001 | Maize | nucleus | 39.08 | 42.15 |
| GSMUA_Achr5P26000_001 | Banana | nucleus | 23.72 | 41.9 |
| TraesCS4D01G187100.1 | Wheat | nucleus | 38.81 | 41.62 |
| Zm00001d040621_P002 | Maize | nucleus | 39.62 | 41.53 |
| Zm00001d028842_P001 | Maize | nucleus | 37.2 | 41.19 |
| TraesCS1D01G021700.1 | Wheat | nucleus | 34.77 | 41.08 |
| OQU86782 | Sorghum | nucleus | 39.89 | 41.0 |
| CDY05636 | Canola | nucleus | 31.54 | 40.34 |
| KRH31822 | Soybean | nucleus | 36.93 | 40.06 |
| AT3G62610.1 | Thale cress | nucleus | 36.93 | 39.94 |
| GSMUA_Achr5P21250_001 | Banana | nucleus | 34.5 | 39.88 |
| Solyc06g009710.2.1 | Tomato | nucleus | 31.81 | 39.73 |
| KRH69237 | Soybean | nucleus | 39.62 | 39.62 |
| TraesCS1B01G023400.1 | Wheat | nucleus | 34.23 | 39.56 |
| CDX85403 | Canola | nucleus | 36.39 | 39.47 |
| TraesCS1B01G005200.1 | Wheat | nucleus | 35.31 | 39.46 |
| GSMUA_Achr10P... | Banana | nucleus | 21.83 | 39.32 |
| PGSC0003DMT400011167 | Potato | nucleus | 28.57 | 39.26 |
| Bra037419.1-P | Field mustard | nucleus | 36.12 | 39.07 |
| CDX86237 | Canola | nucleus | 36.12 | 39.07 |
| AT5G49330.1 | Thale cress | nucleus | 35.85 | 38.89 |
| GSMUA_Achr6P25420_001 | Banana | nucleus | 24.8 | 38.82 |
| EER92385 | Sorghum | nucleus | 37.2 | 38.76 |
| AT2G47460.1 | Thale cress | nucleus | 38.54 | 38.54 |
| TraesCS1B01G023500.1 | Wheat | nucleus | 33.15 | 38.32 |
| TraesCS1B01G049700.1 | Wheat | nucleus | 33.15 | 38.32 |
| PGSC0003DMT400018841 | Potato | nucleus | 31.27 | 38.28 |
| GSMUA_Achr1P26520_001 | Banana | nucleus | 24.8 | 38.17 |
| CDY00035 | Canola | nucleus | 33.42 | 37.58 |
| Solyc01g079620.2.1 | Tomato | nucleus | 34.23 | 37.57 |
| KRG96503 | Soybean | nucleus | 35.85 | 37.57 |
| CDY55384 | Canola | nucleus | 29.65 | 37.29 |
| GSMUA_Achr1P07550_001 | Banana | nucleus | 23.72 | 37.13 |
| KRH68241 | Soybean | nucleus | 35.58 | 36.77 |
| CDY49609 | Canola | nucleus | 34.5 | 36.68 |
| Bra036145.1-P | Field mustard | nucleus | 34.23 | 36.6 |
| Solyc12g049350.1.1 | Tomato | nucleus | 28.84 | 36.52 |
| PGSC0003DMT400023322 | Potato | nucleus | 35.58 | 36.36 |
| TraesCS1A01G021500.1 | Wheat | nucleus | 32.88 | 36.2 |
| GSMUA_Achr5P17010_001 | Banana | nucleus | 23.45 | 36.1 |
| GSMUA_Achr3P07950_001 | Banana | nucleus | 22.91 | 35.71 |
| TraesCS1D01G020900.1 | Wheat | nucleus | 32.61 | 35.69 |
| GSMUA_Achr6P09620_001 | Banana | nucleus | 19.14 | 35.5 |
| KRH11988 | Soybean | nucleus | 31.0 | 34.85 |
| KRH37017 | Soybean | nucleus | 31.27 | 34.73 |
| GSMUA_Achr9P16040_001 | Banana | nucleus | 23.99 | 34.63 |
| GSMUA_Achr9P08600_001 | Banana | nucleus | 25.34 | 34.56 |
| CDX80105 | Canola | nucleus | 30.46 | 34.56 |
| KRH50769 | Soybean | nucleus | 31.0 | 34.12 |
| GSMUA_Achr11P... | Banana | nucleus | 21.56 | 34.04 |
| CDX95725 | Canola | nucleus | 32.34 | 33.99 |
| CDX83327 | Canola | nucleus | 32.08 | 33.81 |
| KRH02323 | Soybean | nucleus | 31.81 | 33.71 |
| VIT_05s0077g01360.t01 | Wine grape | nucleus | 34.77 | 33.68 |
| GSMUA_Achr9P27380_001 | Banana | nucleus | 23.45 | 33.46 |
| GSMUA_Achr3P07940_001 | Banana | nucleus | 25.34 | 33.33 |
| GSMUA_Achr3P27700_001 | Banana | nucleus | 24.53 | 33.21 |
| GSMUA_Achr6P12930_001 | Banana | nucleus | 25.07 | 32.52 |
| Bra004456.1-P | Field mustard | nucleus | 31.81 | 32.33 |
| GSMUA_Achr5P01180_001 | Banana | nucleus | 22.64 | 32.31 |
| Bra000453.1-P | Field mustard | nucleus | 32.61 | 32.18 |
| GSMUA_Achr8P22690_001 | Banana | nucleus | 25.07 | 32.07 |
| GSMUA_Achr3P21000_001 | Banana | nucleus | 21.83 | 31.89 |
| GSMUA_Achr2P17960_001 | Banana | nucleus | 22.1 | 31.78 |
| GSMUA_Achr10P... | Banana | nucleus | 23.72 | 30.99 |
| GSMUA_Achr10P... | Banana | nucleus | 23.18 | 30.94 |
| GSMUA_Achr6P04400_001 | Banana | nucleus | 22.91 | 30.91 |
| GSMUA_Achr7P18560_001 | Banana | nucleus | 22.37 | 30.86 |
| GSMUA_Achr2P19380_001 | Banana | nucleus | 20.22 | 30.74 |
| GSMUA_Achr7P18550_001 | Banana | nucleus | 21.56 | 30.3 |
| GSMUA_Achr4P21700_001 | Banana | nucleus | 18.87 | 30.17 |
| GSMUA_Achr8P14540_001 | Banana | nucleus | 19.68 | 28.08 |
| GSMUA_Achr6P14840_001 | Banana | nucleus | 21.83 | 27.93 |
| GSMUA_Achr10P... | Banana | nucleus | 22.37 | 27.85 |
| GSMUA_Achr7P13700_001 | Banana | nucleus | 22.1 | 26.71 |
| GSMUA_Achr5P06530_001 | Banana | nucleus | 23.72 | 23.47 |
| GSMUA_Achr6P02530_001 | Banana | nucleus | 21.83 | 22.44 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| EnsemblPlantsGene:GSMUA_Achr8G10470_001 | EnsemblPlants:GSMUA_Achr8P10470_001 | EnsemblPlants:GSMUA_Achr8T10470_001 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:M0TPA0 |
| InterPro:Myb-rel_proteinP_C | InterPro:Myb_dom | PFAM:PF00249 | PFAM:PF06640 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF595 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0002959986 | SEG:seg |
Description
Putative Whole genome shotgun sequence of line PN40024, scaffold_5.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr8G10470_001]
Coordinates
chr8:-:7453169..7455527
Molecular Weight (calculated)
40206.8 Da
IEP (calculated)
4.570
GRAVY (calculated)
-0.529
Length
371 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRAPCCEKV GLKKGRWTAE EDEILAKYIA ANGEGSWRSL PKNAGLLRCG KSCRLRWINY LRSDLKRGNI TKEEEAVIIK LHATLGNRWS VIAGHLPGRT
101: DNEIKNYWNS HLSRRIDSFR RLGLDGGDAA VLDLSTLPGA GKRRGGRTSR SAARKNNIGG AVGRGQQQQQ GVVVSPPVSL VQSDHSVVLD PDQNQASSVT
201: NDGLVDAYEE MASELLCCTS PMDGRLWGTD AEMEHVLLGP GEESMAGRGW FHEGDSGVMT SSEERGGLVT VTSGPEEGGA TGLGVETGPE LVTKGEEEVG
301: SSSSQAEKLL DWDLEDMEAE LWDEAGDMWW HSEHQDLGLH GFDDGGYQEE PLDSWLIFSG TSLGDVTALG W
101: DNEIKNYWNS HLSRRIDSFR RLGLDGGDAA VLDLSTLPGA GKRRGGRTSR SAARKNNIGG AVGRGQQQQQ GVVVSPPVSL VQSDHSVVLD PDQNQASSVT
201: NDGLVDAYEE MASELLCCTS PMDGRLWGTD AEMEHVLLGP GEESMAGRGW FHEGDSGVMT SSEERGGLVT VTSGPEEGGA TGLGVETGPE LVTKGEEEVG
301: SSSSQAEKLL DWDLEDMEAE LWDEAGDMWW HSEHQDLGLH GFDDGGYQEE PLDSWLIFSG TSLGDVTALG W
001: MGRAPCCEKV GIKRGRWTAE EDQILSNYIQ SNGEGSWRSL PKNAGLKRCG KSCRLRWINY LRSDLKRGNI TPEEEELVVK LHSTLGNRWS LIAGHLPGRT
101: DNEIKNYWNS HLSRKLHNFI RKPSISQDVS AVIMTNASSA PPPPQAKRRL GRTSRSAMKP KIHRTKTRKT KKTSAPPEPN ADVAGADKEA LMVESSGAEA
201: ELGRPCDYYG DDCNKNLMSI NGDNGVLTFD DDIIDLLLDE SDPGHLYTNT TCGGDGELHN IRDSEGARGF SDTWNQGNLD CLLQSCPSVE SFLNYDHQVN
301: DASTDEFIDW DCVWQEGSDN NLWHEKENPD SMVSWLLDGD DEATIGNSNC ENFGEPLDHD DESALVAWLL S
101: DNEIKNYWNS HLSRKLHNFI RKPSISQDVS AVIMTNASSA PPPPQAKRRL GRTSRSAMKP KIHRTKTRKT KKTSAPPEPN ADVAGADKEA LMVESSGAEA
201: ELGRPCDYYG DDCNKNLMSI NGDNGVLTFD DDIIDLLLDE SDPGHLYTNT TCGGDGELHN IRDSEGARGF SDTWNQGNLD CLLQSCPSVE SFLNYDHQVN
301: DASTDEFIDW DCVWQEGSDN NLWHEKENPD SMVSWLLDGD DEATIGNSNC ENFGEPLDHD DESALVAWLL S
Arabidopsis Description
MYB12Transcription factor MYB12 [Source:UniProtKB/Swiss-Prot;Acc:O22264]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.