Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g009710.2.1 | Tomato | nucleus | 85.81 | 87.54 |
| PGSC0003DMT400011167 | Potato | nucleus | 63.37 | 71.11 |
| KRG94424 | Soybean | nucleus | 21.12 | 69.57 |
| PGSC0003DMT400023322 | Potato | nucleus | 53.14 | 44.35 |
| PGSC0003DMT400078477 | Potato | nucleus | 24.42 | 41.57 |
| PGSC0003DMT400085829 | Potato | nucleus | 23.43 | 38.38 |
| GSMUA_AchrUn_... | Banana | nucleus | 39.6 | 37.5 |
| CDY05636 | Canola | nucleus | 33.33 | 34.83 |
| KRH31822 | Soybean | nucleus | 38.61 | 34.21 |
| KRH69237 | Soybean | nucleus | 41.58 | 33.96 |
| PGSC0003DMT400015803 | Potato | nucleus | 28.05 | 33.46 |
| Os01t0305900-01 | Rice | nucleus | 34.98 | 33.44 |
| CDY00035 | Canola | nucleus | 36.3 | 33.33 |
| Zm00001d047671_P001 | Maize | nucleus | 37.62 | 33.14 |
| Zm00001d028842_P001 | Maize | nucleus | 36.63 | 33.13 |
| KRG96503 | Soybean | nucleus | 38.61 | 33.05 |
| CDX85403 | Canola | nucleus | 37.29 | 33.04 |
| Bra037419.1-P | Field mustard | nucleus | 37.29 | 32.94 |
| CDX86237 | Canola | nucleus | 37.29 | 32.94 |
| VIT_07s0005g01210.t01 | Wine grape | nucleus | 39.6 | 32.7 |
| KRH68241 | Soybean | nucleus | 38.61 | 32.59 |
| TraesCS1D01G021700.1 | Wheat | nucleus | 33.66 | 32.48 |
| AT5G49330.1 | Thale cress | nucleus | 36.63 | 32.46 |
| GSMUA_Achr5P21250_001 | Banana | nucleus | 34.32 | 32.4 |
| HORVU4Hr1G054420.3 | Barley | nucleus | 36.3 | 32.35 |
| TraesCS4B01G186000.1 | Wheat | nucleus | 36.3 | 31.79 |
| TraesCS4A01G118400.1 | Wheat | nucleus | 36.3 | 31.79 |
| PGSC0003DMT400034372 | Potato | nucleus | 28.05 | 31.72 |
| Bra036145.1-P | Field mustard | nucleus | 36.3 | 31.7 |
| CDY49609 | Canola | nucleus | 36.3 | 31.52 |
| TraesCS4D01G187100.1 | Wheat | nucleus | 35.97 | 31.5 |
| GSMUA_Achr8P10470_001 | Banana | nucleus | 38.28 | 31.27 |
| TraesCS1B01G023400.1 | Wheat | nucleus | 32.67 | 30.84 |
| TraesCS1B01G005200.1 | Wheat | nucleus | 33.33 | 30.42 |
| TraesCS1B01G049700.1 | Wheat | nucleus | 32.01 | 30.22 |
| TraesCS1A01G021500.1 | Wheat | nucleus | 33.33 | 29.97 |
| TraesCS1D01G020900.1 | Wheat | nucleus | 33.33 | 29.79 |
| Zm00001d040621_P002 | Maize | nucleus | 34.65 | 29.66 |
| TraesCS1B01G023500.1 | Wheat | nucleus | 31.35 | 29.59 |
| PGSC0003DMT400031607 | Potato | nucleus | 26.4 | 29.3 |
| OQU86782 | Sorghum | nucleus | 34.65 | 29.09 |
| EER92385 | Sorghum | nucleus | 33.99 | 28.93 |
| PGSC0003DMT400080427 | Potato | nucleus | 27.06 | 28.77 |
| PGSC0003DMT400079416 | Potato | nucleus | 20.13 | 28.37 |
| PGSC0003DMT400014983 | Potato | nucleus | 25.74 | 24.15 |
| PGSC0003DMT400060236 | Potato | nucleus | 27.72 | 18.03 |
| PGSC0003DMT400030322 | Potato | nucleus | 0.99 | 1.83 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:102604216 | MapMan:15.5.2.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:M1AB81 | InterPro:Myb_dom |
| PFAM:PF00249 | EnsemblPlantsGene:PGSC0003DMG400007304 | PGSC:PGSC0003DMG400007304 | EnsemblPlants:PGSC0003DMT400018841 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF203 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0002957870 | RefSeq:XP_006355861.1 |
| SEG:seg | : | : | : | : | : |
Description
MYB12 [Source:PGSC_GENE;Acc:PGSC0003DMG400007304]
Coordinates
chr6:+:116491..118710
Molecular Weight (calculated)
35041.7 Da
IEP (calculated)
4.465
GRAVY (calculated)
-0.915
Length
303 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRTPCCEKV GLKRGRWTSE EDEIITNYIQ ANGEGSWRSL PKNAGLLRCG KSCRLRWINY LKTDLKRGNI TSDEEAIIIK LRATLGNRWS LIVEHLPGRT
101: DNEIKNYWNS HLSRKVDSLR IPSDEKLPQA VVELAKKGTQ QHISKRGRRR KINTSVSNST NEITVNNDIE FDRTDDKMLW DDDIMLMDDK YGELDQDFIT
201: NCLWDGEGEN LEIANDDNNN NNNNNEILSE DNYGKLDCWD WEYLGEVLNN EIWTNSTKEA EQENNNNMSL CDINDNMQNC MNKEATPENI DPMQSDLVTW
301: LLS
101: DNEIKNYWNS HLSRKVDSLR IPSDEKLPQA VVELAKKGTQ QHISKRGRRR KINTSVSNST NEITVNNDIE FDRTDDKMLW DDDIMLMDDK YGELDQDFIT
201: NCLWDGEGEN LEIANDDNNN NNNNNEILSE DNYGKLDCWD WEYLGEVLNN EIWTNSTKEA EQENNNNMSL CDINDNMQNC MNKEATPENI DPMQSDLVTW
301: LLS
001: MGRAPCCEKI GLKRGRWTAE EDEILTKYIQ TNGEGSWRSL PKKAGLLRCG KSCRLRWINY LRRDLKRGNI TSDEEEIIVK LHSLLGNRWS LIATHLPGRT
101: DNEIKNYWNS HLSRKIYAFT AVSGDGHNLL VNDVVLKKSC SSSSGAKNNN KTKKKKKGRT SRSSMKKHKQ MVTASQCFSQ PKELESDFSE GGQNGNFEGE
201: SLGPYEWLDG ELERLLSSCV WECTSEEAVI GVNDEKVCES GDNSSCCVNL FEEEQGSETK IGHVGITEVD HDMTVERERE GSFLSSNSNE NNDKDWWVGL
301: CNSSEVGFGV DEELLDWEFQ GNVTCQSDDL WDLSDIGEIT LE
101: DNEIKNYWNS HLSRKIYAFT AVSGDGHNLL VNDVVLKKSC SSSSGAKNNN KTKKKKKGRT SRSSMKKHKQ MVTASQCFSQ PKELESDFSE GGQNGNFEGE
201: SLGPYEWLDG ELERLLSSCV WECTSEEAVI GVNDEKVCES GDNSSCCVNL FEEEQGSETK IGHVGITEVD HDMTVERERE GSFLSSNSNE NNDKDWWVGL
301: CNSSEVGFGV DEELLDWEFQ GNVTCQSDDL WDLSDIGEIT LE
Arabidopsis Description
MYB111Transcription factor MYB111 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ07]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.