Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc05g008250.1.1 | Tomato | nucleus | 93.82 | 93.82 |
| VIT_17s0000g02650.t01 | Wine grape | nucleus | 58.43 | 63.03 |
| GSMUA_AchrUn_... | Banana | nucleus | 60.67 | 55.67 |
| VIT_01s0011g04760.t01 | Wine grape | nucleus | 68.54 | 54.22 |
| KRG89277 | Soybean | nucleus | 66.29 | 52.91 |
| GSMUA_Achr10P... | Banana | nucleus | 58.99 | 50.97 |
| KRH50345 | Soybean | nucleus | 65.73 | 50.65 |
| KRH15114 | Soybean | nucleus | 52.81 | 50.27 |
| VIT_14s0006g01620.t01 | Wine grape | nucleus | 63.48 | 49.56 |
| KRH73023 | Soybean | nucleus | 61.24 | 49.55 |
| VIT_17s0000g02660.t01 | Wine grape | nucleus | 61.24 | 47.6 |
| GSMUA_Achr3P21000_001 | Banana | nucleus | 62.92 | 44.09 |
| PGSC0003DMT400085829 | Potato | nucleus | 45.51 | 43.78 |
| GSMUA_Achr6P09620_001 | Banana | nucleus | 48.88 | 43.5 |
| PGSC0003DMT400015803 | Potato | nucleus | 55.06 | 38.58 |
| PGSC0003DMT400034372 | Potato | nucleus | 55.62 | 36.94 |
| PGSC0003DMT400080427 | Potato | nucleus | 52.81 | 32.98 |
| PGSC0003DMT400031607 | Potato | nucleus | 50.0 | 32.6 |
| PGSC0003DMT400079416 | Potato | nucleus | 38.76 | 32.09 |
| PGSC0003DMT400014983 | Potato | nucleus | 50.56 | 27.86 |
| PGSC0003DMT400011167 | Potato | nucleus | 42.13 | 27.78 |
| PGSC0003DMT400018841 | Potato | nucleus | 41.57 | 24.42 |
| PGSC0003DMT400023322 | Potato | nucleus | 44.38 | 21.76 |
| PGSC0003DMT400060236 | Potato | nucleus | 45.51 | 17.38 |
| PGSC0003DMT400030322 | Potato | nucleus | 2.25 | 2.44 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:102578287 | EntrezGene:102585229 | MapMan:15.5.2.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:M1D070 | InterPro:Myb_dom |
| PFAM:PF00249 | EnsemblPlantsGene:PGSC0003DMG400030548 | PGSC:PGSC0003DMG400030548 | EnsemblPlants:PGSC0003DMT400078477 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF507 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI000294A8F8 | RefSeq:XP_006344224.1 |
Description
Myb-like transcription factor 6 [Source:PGSC_GENE;Acc:PGSC0003DMG400030548]
Coordinates
chr5:+:4046634..4048350
Molecular Weight (calculated)
20711.8 Da
IEP (calculated)
9.258
GRAVY (calculated)
-0.822
Length
178 amino acids
Sequence
(BLAST)
(BLAST)
001: MRKPCCDNKE EMHKGAWSKQ EDQKLIDYIT KHGEGCWRDL PKAAGLLRCG KSCRLRWMNY LNPNLKRGNF SEDEDDLIIK LHALLGNRWS LIAGRLPGRT
101: DNEVKNYWNS YLRRKLIKMG IDPKNHRLSH YLHIKRLEFL QENNTRSEND GVIFDAASSC ANKDQQITSS LLDLNSLP
101: DNEVKNYWNS YLRRKLIKMG IDPKNHRLSH YLHIKRLEFL QENNTRSEND GVIFDAASSC ANKDQQITSS LLDLNSLP
001: MGRSPCCEKA HMNKGAWTKE EDQLLVDYIR KHGEGCWRSL PRAAGLQRCG KSCRLRWMNY LRPDLKRGNF TEEEDELIIK LHSLLGNKWS LIAGRLPGRT
101: DNEIKNYWNT HIKRKLLSRG IDPNSHRLIN ESVVSPSSLQ NDVVETIHLD FSGPVKPEPV REEIGMVNNC ESSGTTSEKD YGNEEDWVLN LELSVGPSYR
201: YESTRKVSVV DSAESTRRWG SELFGAHESD AVCLCCRIGL FRNESCRNCR VSDVRTH
101: DNEIKNYWNT HIKRKLLSRG IDPNSHRLIN ESVVSPSSLQ NDVVETIHLD FSGPVKPEPV REEIGMVNNC ESSGTTSEKD YGNEEDWVLN LELSVGPSYR
201: YESTRKVSVV DSAESTRRWG SELFGAHESD AVCLCCRIGL FRNESCRNCR VSDVRTH
Arabidopsis Description
MYB3MYB3 [Source:UniProtKB/TrEMBL;Acc:A0A178WFN1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.