Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g082890.2.1 | Tomato | nucleus | 93.04 | 89.75 |
| PGSC0003DMT400085829 | Potato | nucleus | 37.36 | 55.14 |
| PGSC0003DMT400014983 | Potato | nucleus | 59.34 | 50.15 |
| PGSC0003DMT400078477 | Potato | nucleus | 32.6 | 50.0 |
| KRG97208 | Soybean | nucleus | 42.12 | 40.93 |
| VIT_15s0046g00170.t01 | Wine grape | nucleus | 41.76 | 39.86 |
| PGSC0003DMT400015803 | Potato | nucleus | 35.53 | 38.19 |
| PGSC0003DMT400034372 | Potato | nucleus | 36.63 | 37.31 |
| KRH68929 | Soybean | nucleus | 33.33 | 37.14 |
| KRH47884 | Soybean | nucleus | 37.0 | 34.83 |
| KRH06443 | Soybean | nucleus | 37.0 | 34.47 |
| PGSC0003DMT400079416 | Potato | nucleus | 27.11 | 34.42 |
| PGSC0003DMT400080427 | Potato | nucleus | 32.97 | 31.58 |
| PGSC0003DMT400011167 | Potato | nucleus | 28.94 | 29.26 |
| PGSC0003DMT400018841 | Potato | nucleus | 29.3 | 26.4 |
| PGSC0003DMT400023322 | Potato | nucleus | 30.04 | 22.59 |
| PGSC0003DMT400060236 | Potato | nucleus | 30.04 | 17.6 |
| PGSC0003DMT400030322 | Potato | nucleus | 2.2 | 3.66 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:102596297 | MapMan:15.5.2.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:M1AVX2 | InterPro:Myb_dom | PFAM:PF00249 |
| EnsemblPlantsGene:PGSC0003DMG400012126 | PGSC:PGSC0003DMG400012126 | EnsemblPlants:PGSC0003DMT400031607 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF613 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI000294F03C | RefSeq:XP_006343803.1 | SEG:seg |
Description
MYB transcription factor MYB185 [Source:PGSC_GENE;Acc:PGSC0003DMG400012126]
Coordinates
chr8:-:56463901..56465212
Molecular Weight (calculated)
31517.0 Da
IEP (calculated)
9.608
GRAVY (calculated)
-0.757
Length
273 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRAPCCVKE GLRKGPWSTK EDLLLTNYIN QYGEGQWRSL PKNAGLLRCG KSCRLRWVNY LKPGIKRGNF SEDEEDLIVR LHSLLGNRWS LIAGRLPGRT
101: DNEIKNYWNT HLIKKLKSTG IEPKPHKNFT KKEKSRKKVG KKSNNEKFKG QIVQVEKIKV FAPKPIRISC GILRNNSFEN DTLGTTTCSS NSNFEKVDVG
201: KDKEKEVKLF PRELDFGELL EGDGFFDEIL MGESCKFSNK VEMNDNMVEK VYEEYLLLLS EIQEDQKEQK FLM
101: DNEIKNYWNT HLIKKLKSTG IEPKPHKNFT KKEKSRKKVG KKSNNEKFKG QIVQVEKIKV FAPKPIRISC GILRNNSFEN DTLGTTTCSS NSNFEKVDVG
201: KDKEKEVKLF PRELDFGELL EGDGFFDEIL MGESCKFSNK VEMNDNMVEK VYEEYLLLLS EIQEDQKEQK FLM
001: MGRSPCCEKA HMNKGAWTKE EDQLLVDYIR KHGEGCWRSL PRAAGLQRCG KSCRLRWMNY LRPDLKRGNF TEEEDELIIK LHSLLGNKWS LIAGRLPGRT
101: DNEIKNYWNT HIKRKLLSRG IDPNSHRLIN ESVVSPSSLQ NDVVETIHLD FSGPVKPEPV REEIGMVNNC ESSGTTSEKD YGNEEDWVLN LELSVGPSYR
201: YESTRKVSVV DSAESTRRWG SELFGAHESD AVCLCCRIGL FRNESCRNCR VSDVRTH
101: DNEIKNYWNT HIKRKLLSRG IDPNSHRLIN ESVVSPSSLQ NDVVETIHLD FSGPVKPEPV REEIGMVNNC ESSGTTSEKD YGNEEDWVLN LELSVGPSYR
201: YESTRKVSVV DSAESTRRWG SELFGAHESD AVCLCCRIGL FRNESCRNCR VSDVRTH
Arabidopsis Description
MYB3MYB3 [Source:UniProtKB/TrEMBL;Acc:A0A178WFN1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.