Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH68929 | Soybean | nucleus | 80.78 | 92.65 |
| Solyc12g096200.1.1 | Tomato | nucleus | 32.03 | 72.0 |
| VIT_15s0046g00170.t01 | Wine grape | nucleus | 59.07 | 58.04 |
| KRG94424 | Soybean | nucleus | 18.86 | 57.61 |
| PGSC0003DMT400085829 | Potato | nucleus | 34.88 | 52.97 |
| KRH60702 | Soybean | nucleus | 35.23 | 47.14 |
| KRH51400 | Soybean | nucleus | 37.01 | 44.26 |
| PGSC0003DMT400031607 | Potato | nucleus | 40.93 | 42.12 |
| Solyc08g082890.2.1 | Tomato | nucleus | 41.99 | 41.7 |
| KRH77336 | Soybean | nucleus | 26.69 | 41.21 |
| KRH29280 | Soybean | nucleus | 35.94 | 41.06 |
| KRH47884 | Soybean | nucleus | 42.35 | 41.03 |
| KRH28144 | Soybean | nucleus | 26.33 | 40.44 |
| KRH24301 | Soybean | nucleus | 36.3 | 40.32 |
| KRH06443 | Soybean | nucleus | 41.99 | 40.27 |
| KRH04166 | Soybean | nucleus | 28.11 | 40.1 |
| Solyc08g005870.1.1 | Tomato | nucleus | 39.86 | 39.58 |
| KRG89277 | Soybean | nucleus | 30.96 | 39.01 |
| KRH41018 | Soybean | nucleus | 30.25 | 38.99 |
| Solyc08g008480.2.1 | Tomato | nucleus | 44.13 | 38.87 |
| KRH73023 | Soybean | nucleus | 30.25 | 38.64 |
| KRH50345 | Soybean | nucleus | 31.32 | 38.1 |
| KRH12516 | Soybean | nucleus | 24.2 | 37.57 |
| PGSC0003DMT400014983 | Potato | nucleus | 43.06 | 37.46 |
| KRH15114 | Soybean | nucleus | 24.91 | 37.43 |
| KRH54016 | Soybean | nucleus | 38.43 | 35.88 |
| KRH63931 | Soybean | nucleus | 37.72 | 35.1 |
| KRH47594 | Soybean | nucleus | 33.81 | 34.67 |
| KRH06177 | Soybean | nucleus | 33.1 | 32.63 |
| KRH06175 | Soybean | nucleus | 30.25 | 31.6 |
| KRG91990 | Soybean | nucleus | 30.61 | 31.39 |
| KRH19274 | Soybean | nucleus | 33.81 | 31.25 |
| KRH34790 | Soybean | nucleus | 30.25 | 31.02 |
| KRH02634 | Soybean | nucleus | 33.81 | 30.94 |
| KRH47591 | Soybean | nucleus | 29.18 | 30.94 |
| KRG91991 | Soybean | nucleus | 29.89 | 30.88 |
| KRH34791 | Soybean | nucleus | 29.89 | 30.77 |
| KRH17997 | Soybean | nucleus, plastid | 38.08 | 30.23 |
| KRH16413 | Soybean | nucleus | 38.08 | 29.64 |
| KRH50769 | Soybean | nucleus | 33.45 | 27.89 |
| KRH11988 | Soybean | nucleus | 32.03 | 27.27 |
| KRH31822 | Soybean | nucleus | 32.74 | 26.9 |
| KRH37017 | Soybean | nucleus | 31.67 | 26.65 |
| KRH02323 | Soybean | nucleus | 32.38 | 26.0 |
| KRG96503 | Soybean | nucleus | 32.74 | 25.99 |
| KRH68241 | Soybean | nucleus | 32.38 | 25.35 |
| KRH69237 | Soybean | nucleus | 32.38 | 24.53 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EntrezGene:778044 | EMBL:ACUP02012180 | EMBL:DQ822900 | EnsemblPlantsGene:GLYMA_19G257400 |
| GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006357 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0030154 |
| GO:GO:0043565 | GO:GO:0044212 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | EnsemblPlants:KRG97208 | ProteinID:KRG97208 |
| ProteinID:KRG97208.1 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF613 |
| UniProt:Q0PJK2 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0000DBD8A8 | SEG:seg |
Description
hypothetical protein
Coordinates
chr19:-:50136092..50138677
Molecular Weight (calculated)
31876.6 Da
IEP (calculated)
7.858
GRAVY (calculated)
-0.875
Length
281 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRAPCCSKV GLHRGPWTPR EDALLTKYIQ THGEGQWRSL PKRAGLLRCG KSCRLRWMNY LRPDIKRGNI TPEEDDLIVR MHSLLGNRWS LIAGRLPGRT
101: DNEIKNYWNT HLSKKLRNQG TDPKTHDKLT EAPEKKKGKK KNKQKNENNK GSEKTLVYLP KPIRVKALSS CIPRTDSTLT LNSNSATAST SEEKVQSPEA
201: EVKEVNMVWG VGDDADNGGI EIFFGEDHDL VNNTASYEEC YSDVHTDDHG TLEKLYEEYL QLLNVEEKPD ELDSFAQSLL V
101: DNEIKNYWNT HLSKKLRNQG TDPKTHDKLT EAPEKKKGKK KNKQKNENNK GSEKTLVYLP KPIRVKALSS CIPRTDSTLT LNSNSATAST SEEKVQSPEA
201: EVKEVNMVWG VGDDADNGGI EIFFGEDHDL VNNTASYEEC YSDVHTDDHG TLEKLYEEYL QLLNVEEKPD ELDSFAQSLL V
001: MMSCGGKKPV SKKTTPCCTK MGMKRGPWTV EEDEILVSFI KKEGEGRWRS LPKRAGLLRC GKSCRLRWMN YLRPSVKRGG ITSDEEDLIL RLHRLLGNRW
101: SLIAGRIPGR TDNEIKNYWN THLRKKLLRQ GIDPQTHKPL DANNIHKPEE EVSGGQKYPL EPISSSHTDD TTVNGGDGDS KNSINVFGGE HGYEDFGFCY
201: DDKFSSFLNS LINDVGDPFG NIIPISQPLQ MDDCKDGIVG ASSSSLGHD
101: SLIAGRIPGR TDNEIKNYWN THLRKKLLRQ GIDPQTHKPL DANNIHKPEE EVSGGQKYPL EPISSSHTDD TTVNGGDGDS KNSINVFGGE HGYEDFGFCY
201: DDKFSSFLNS LINDVGDPFG NIIPISQPLQ MDDCKDGIVG ASSSSLGHD
Arabidopsis Description
MYB5MYB5 [Source:UniProtKB/TrEMBL;Acc:A0A178VAR4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.