CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG94424	Soybean	nucleus	20.99	41.3
KRH60702	Soybean	nucleus	40.33	34.76
KRH77336	Soybean	nucleus	34.81	34.62
KRH28144	Soybean	nucleus	34.81	34.43
KRH73023	Soybean	nucleus	39.78	32.73
KRH04166	Soybean	nucleus	33.7	30.96
KRH51400	Soybean	nucleus	39.78	30.64
KRH34790	Soybean	nucleus	45.86	30.29
KRG91991	Soybean	nucleus	45.3	30.15
KRG91990	Soybean	nucleus	45.3	29.93
KRH34791	Soybean	nucleus	44.2	29.3
KRH41018	Soybean	nucleus	34.81	28.9
KRG89277	Soybean	nucleus	35.36	28.7
KRH29280	Soybean	nucleus	38.67	28.46
KRH15114	Soybean	nucleus	29.28	28.34
KRH50345	Soybean	nucleus	35.91	28.14
KRH24301	Soybean	nucleus	38.67	27.67
KRH47591	Soybean	nucleus	40.33	27.55
KRH06175	Soybean	nucleus	40.88	27.51
KRH19274	Soybean	nucleus	44.75	26.64
KRH47594	Soybean	nucleus	40.33	26.64
KRH02634	Soybean	nucleus	44.75	26.38
KRH06177	Soybean	nucleus	40.88	25.96
KRG97208	Soybean	nucleus	37.57	24.2
KRH68929	Soybean	nucleus	32.6	24.08
KRH54016	Soybean	nucleus	39.78	23.92
KRH63931	Soybean	nucleus	39.78	23.84
KRH47884	Soybean	nucleus	37.02	23.1
KRH06443	Soybean	nucleus	37.02	22.87
KRH11988	Soybean	nucleus	36.46	20.0
KRH37017	Soybean	nucleus	35.91	19.46
KRH50769	Soybean	nucleus	35.36	18.99
KRH17997	Soybean	nucleus, plastid	37.02	18.93
KRH02323	Soybean	nucleus	36.46	18.86
KRH16413	Soybean	nucleus	36.46	18.28
KRH31822	Soybean	nucleus	34.25	18.13
KRH68241	Soybean	nucleus	33.7	16.99
KRG96503	Soybean	nucleus	33.15	16.95
KRH69237	Soybean	nucleus	34.25	16.71

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	EMBL:ACUP02009331	EnsemblPlantsGene:GLYMA_15G176000	GO:GO:0000981	GO:GO:0001135
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006357	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0030154	GO:GO:0043565	GO:GO:0044212
InterPro:Homeobox-like_sf	UniProt:I1MHE2	InterPro:IPR017930	EnsemblPlants:KRH12516	ProteinID:KRH12516	ProteinID:KRH12516.1
InterPro:Myb_dom	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF459	InterPro:SANT/Myb
SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI00023D1919	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr15:-:16596963..16598347

Molecular Weight (calculated)

21036.6 Da

IEP (calculated)

8.610

GRAVY (calculated)

-1.004

Length

181 amino acids

Sequence
(BLAST)

001: METKDDSAEK EEAWSSHEDE ILLNYVQVRG EGNWRNLPKR AGLKRCGESC KQRWLNYLKP TISRGNISLD EHELIIRLHK LLGNSNYTCR RWSIIAGRLP
101: GRTEEEIKNY WNTYLRKEAE ENQNNKNEFP STSMTTTSMS SVQSPWYSEN SVGTNPTESP NPVIRPKVVR LSKFNLSCQD R

Best Arabidopsis Sequence Match ( AT5G35550.1 )
(BLAST)

001: MGKRATTSVR REELNRGAWT DHEDKILRDY ITTHGEGKWS TLPNQAGLKR CGKSCRLRWK NYLRPGIKRG NISSDEEELI IRLHNLLGNR WSLIAGRLPG
101: RTDNEIKNHW NSNLRKRLPK TQTKQPKRIK HSTNNENNVC VIRTKAIRCS KTLLFSDLSL QKKSSTSPLP LKEQEMDQGG SSLMGDLEFD FDRIHSEFHF
201: PDLMDFDGLD CGNVTSLVSS NEILGELVPA QGNLDLNRPF TSCHHRGDDE DWLRDFTC

Arabidopsis Description

TT2Duplicated homeodomain-like superfamily protein [Source:TAIR;Acc:AT5G35550]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.