Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH47884 | Soybean | nucleus | 93.86 | 94.83 |
| Solyc12g096200.1.1 | Tomato | nucleus | 31.06 | 72.8 |
| KRG94424 | Soybean | nucleus | 18.43 | 58.7 |
| PGSC0003DMT400085829 | Potato | nucleus | 31.4 | 49.73 |
| KRH60702 | Soybean | nucleus | 33.11 | 46.19 |
| KRH51400 | Soybean | nucleus | 34.13 | 42.55 |
| KRH77336 | Soybean | nucleus | 26.28 | 42.31 |
| KRG97208 | Soybean | nucleus | 40.27 | 41.99 |
| KRH41018 | Soybean | nucleus | 30.72 | 41.28 |
| VIT_15s0046g00170.t01 | Wine grape | nucleus | 40.27 | 41.26 |
| KRH28144 | Soybean | nucleus | 25.6 | 40.98 |
| KRH04166 | Soybean | nucleus | 27.3 | 40.61 |
| KRH29280 | Soybean | nucleus | 33.79 | 40.24 |
| KRG89277 | Soybean | nucleus | 30.03 | 39.46 |
| KRH24301 | Soybean | nucleus | 33.79 | 39.13 |
| KRH73023 | Soybean | nucleus | 29.35 | 39.09 |
| KRH15114 | Soybean | nucleus | 24.23 | 37.97 |
| KRH50345 | Soybean | nucleus | 29.35 | 37.23 |
| KRH12516 | Soybean | nucleus | 22.87 | 37.02 |
| PGSC0003DMT400031607 | Potato | nucleus | 34.47 | 37.0 |
| KRH68929 | Soybean | nucleus | 30.38 | 36.33 |
| Solyc08g082890.2.1 | Tomato | nucleus | 34.47 | 35.69 |
| KRH47594 | Soybean | nucleus | 32.76 | 35.04 |
| Solyc08g005870.1.1 | Tomato | nucleus | 32.76 | 33.92 |
| KRH06177 | Soybean | nucleus | 32.08 | 32.98 |
| Solyc08g008480.2.1 | Tomato | nucleus | 35.84 | 32.92 |
| KRH54016 | Soybean | nucleus | 33.79 | 32.89 |
| KRG91990 | Soybean | nucleus | 30.72 | 32.85 |
| PGSC0003DMT400014983 | Potato | nucleus | 35.84 | 32.51 |
| KRH63931 | Soybean | nucleus | 33.45 | 32.45 |
| KRG91991 | Soybean | nucleus | 30.03 | 32.35 |
| KRH06175 | Soybean | nucleus | 29.69 | 32.34 |
| KRH19274 | Soybean | nucleus | 33.45 | 32.24 |
| KRH34790 | Soybean | nucleus | 30.03 | 32.12 |
| KRH47591 | Soybean | nucleus | 29.01 | 32.08 |
| KRH34791 | Soybean | nucleus | 29.69 | 31.87 |
| KRH02634 | Soybean | nucleus | 33.11 | 31.6 |
| KRH17997 | Soybean | nucleus, plastid | 33.45 | 27.68 |
| KRH11988 | Soybean | nucleus | 30.72 | 27.27 |
| KRH16413 | Soybean | nucleus | 33.11 | 26.87 |
| KRH50769 | Soybean | nucleus | 30.72 | 26.71 |
| KRH37017 | Soybean | nucleus | 30.38 | 26.65 |
| KRH02323 | Soybean | nucleus | 31.06 | 26.0 |
| KRH68241 | Soybean | nucleus | 31.74 | 25.91 |
| KRG96503 | Soybean | nucleus | 31.06 | 25.71 |
| KRH31822 | Soybean | nucleus | 29.69 | 25.44 |
| KRH69237 | Soybean | nucleus | 31.74 | 25.07 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100101857 | MapMan:15.5.2.1 | EMBL:ACUP02009836 | EMBL:DQ822903 | EnsemblPlantsGene:GLYMA_16G023000 |
| GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006357 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0030154 |
| GO:GO:0043565 | GO:GO:0044212 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | EnsemblPlants:KRH06443 | ProteinID:KRH06443 |
| ProteinID:KRH06443.1 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF613 |
| UniProt:Q0PJJ9 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0000DBD8AB | SEG:seg |
Description
hypothetical protein
Coordinates
chr16:+:2180288..2181712
Molecular Weight (calculated)
33219.0 Da
IEP (calculated)
8.212
GRAVY (calculated)
-1.001
Length
293 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRAPCCSKV GLHKGPWTPK EDALLTKYIQ AHGEGQWKSL PKKAGLLRCG KSCRLRWMNY LRPDIKRGNI APEEDDLIIR MHSLLGNRWS LIAGRLPGRT
101: DNEIKNYWNT HLSKKLKIQG TEDTDTHKML ENPQEEAASD GGNNNKKKKK KKNGGKKNKQ KNKGKENDEP PKTQVYLPKP IRVKAMYLQR TDSNTFTFDS
201: NSASGSTSQE KEESPVTKES NVVSEVGNVG EESDGFGFFS EDHDLVNVSD IECHSYFPTD HGNLQQLYEE YFQLLNMDHG QFELNSFAES LLD
101: DNEIKNYWNT HLSKKLKIQG TEDTDTHKML ENPQEEAASD GGNNNKKKKK KKNGGKKNKQ KNKGKENDEP PKTQVYLPKP IRVKAMYLQR TDSNTFTFDS
201: NSASGSTSQE KEESPVTKES NVVSEVGNVG EESDGFGFFS EDHDLVNVSD IECHSYFPTD HGNLQQLYEE YFQLLNMDHG QFELNSFAES LLD
001: MMSCGGKKPV SKKTTPCCTK MGMKRGPWTV EEDEILVSFI KKEGEGRWRS LPKRAGLLRC GKSCRLRWMN YLRPSVKRGG ITSDEEDLIL RLHRLLGNRW
101: SLIAGRIPGR TDNEIKNYWN THLRKKLLRQ GIDPQTHKPL DANNIHKPEE EVSGGQKYPL EPISSSHTDD TTVNGGDGDS KNSINVFGGE HGYEDFGFCY
201: DDKFSSFLNS LINDVGDPFG NIIPISQPLQ MDDCKDGIVG ASSSSLGHD
101: SLIAGRIPGR TDNEIKNYWN THLRKKLLRQ GIDPQTHKPL DANNIHKPEE EVSGGQKYPL EPISSSHTDD TTVNGGDGDS KNSINVFGGE HGYEDFGFCY
201: DDKFSSFLNS LINDVGDPFG NIIPISQPLQ MDDCKDGIVG ASSSSLGHD
Arabidopsis Description
MYB5MYB5 [Source:UniProtKB/TrEMBL;Acc:A0A178VAR4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.