Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g008480.2.1 | Tomato | nucleus | 91.02 | 92.16 |
| PGSC0003DMT400031607 | Potato | nucleus | 50.15 | 59.34 |
| PGSC0003DMT400085829 | Potato | nucleus | 30.03 | 52.43 |
| PGSC0003DMT400078477 | Potato | nucleus | 27.86 | 50.56 |
| KRG97208 | Soybean | nucleus | 37.46 | 43.06 |
| VIT_15s0046g00170.t01 | Wine grape | nucleus | 37.46 | 42.31 |
| KRH68929 | Soybean | nucleus | 30.65 | 40.41 |
| PGSC0003DMT400015803 | Potato | nucleus | 31.58 | 40.16 |
| KRH47884 | Soybean | nucleus | 32.51 | 36.21 |
| PGSC0003DMT400034372 | Potato | nucleus | 30.03 | 36.19 |
| KRH06443 | Soybean | nucleus | 32.51 | 35.84 |
| PGSC0003DMT400079416 | Potato | nucleus | 23.53 | 35.35 |
| PGSC0003DMT400080427 | Potato | nucleus | 30.03 | 34.04 |
| PGSC0003DMT400011167 | Potato | nucleus | 24.46 | 29.26 |
| PGSC0003DMT400018841 | Potato | nucleus | 24.15 | 25.74 |
| PGSC0003DMT400023322 | Potato | nucleus | 25.7 | 22.86 |
| PGSC0003DMT400060236 | Potato | nucleus | 25.39 | 17.6 |
| PGSC0003DMT400030322 | Potato | nucleus | 1.55 | 3.05 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:102603294 | MapMan:15.5.2.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:M1A577 | InterPro:Myb_dom | PFAM:PF00249 |
| EnsemblPlantsGene:PGSC0003DMG400005848 | PGSC:PGSC0003DMG400005848 | EnsemblPlants:PGSC0003DMT400014983 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF613 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI000294D4CC | RefSeq:XP_015166333.1 | SEG:seg |
Description
MYB transcription factor MYB92 [Source:PGSC_GENE;Acc:PGSC0003DMG400005848]
Coordinates
chr8:-:5318295..5319957
Molecular Weight (calculated)
36717.5 Da
IEP (calculated)
9.679
GRAVY (calculated)
-0.679
Length
323 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRAPCCAKE GLRKGPWSTK EDLLLANYIK ENGEGQWRNL PNKAGLLRCG KSCRLRWMNY LRPGIKRGNF SQDEEDLIIR LHSLLGNRWS LIAGRLPGRT
101: DNEIKNYWNT HVIKKLKIAG IQPKLHKVHK VSPKKDPKKK PKTENPRKKQ DKMKKNNKKK DQSLDTPQVV FVPKPIRLSS ELIRNSSIEN VALLSNSSLC
201: CSNSLKMLPQ TCQVLKKCTI SKGSDIHLSA FLKSPSNIAS PSDSYEEGDN NNKKINVITN DDENVEGKIK EVSFIPCASN LLFDEVLLDG FCDLSNESML
301: EKVYEEYLQL ISEKCYQDDP MLM
101: DNEIKNYWNT HVIKKLKIAG IQPKLHKVHK VSPKKDPKKK PKTENPRKKQ DKMKKNNKKK DQSLDTPQVV FVPKPIRLSS ELIRNSSIEN VALLSNSSLC
201: CSNSLKMLPQ TCQVLKKCTI SKGSDIHLSA FLKSPSNIAS PSDSYEEGDN NNKKINVITN DDENVEGKIK EVSFIPCASN LLFDEVLLDG FCDLSNESML
301: EKVYEEYLQL ISEKCYQDDP MLM
001: MMSCGGKKPV SKKTTPCCTK MGMKRGPWTV EEDEILVSFI KKEGEGRWRS LPKRAGLLRC GKSCRLRWMN YLRPSVKRGG ITSDEEDLIL RLHRLLGNRW
101: SLIAGRIPGR TDNEIKNYWN THLRKKLLRQ GIDPQTHKPL DANNIHKPEE EVSGGQKYPL EPISSSHTDD TTVNGGDGDS KNSINVFGGE HGYEDFGFCY
201: DDKFSSFLNS LINDVGDPFG NIIPISQPLQ MDDCKDGIVG ASSSSLGHD
101: SLIAGRIPGR TDNEIKNYWN THLRKKLLRQ GIDPQTHKPL DANNIHKPEE EVSGGQKYPL EPISSSHTDD TTVNGGDGDS KNSINVFGGE HGYEDFGFCY
201: DDKFSSFLNS LINDVGDPFG NIIPISQPLQ MDDCKDGIVG ASSSSLGHD
Arabidopsis Description
MYB5MYB5 [Source:UniProtKB/TrEMBL;Acc:A0A178VAR4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.