Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc12g049350.1.1 | Tomato | nucleus | 88.89 | 81.91 |
| KRG94424 | Soybean | nucleus | 23.7 | 69.57 |
| PGSC0003DMT400018841 | Potato | nucleus | 71.11 | 63.37 |
| PGSC0003DMT400023322 | Potato | nucleus | 56.67 | 42.15 |
| PGSC0003DMT400078477 | Potato | nucleus | 27.78 | 42.13 |
| PGSC0003DMT400085829 | Potato | nucleus | 25.93 | 37.84 |
| GSMUA_AchrUn_... | Banana | nucleus | 42.22 | 35.62 |
| CDY05636 | Canola | nucleus | 37.78 | 35.17 |
| KRH31822 | Soybean | nucleus | 41.48 | 32.75 |
| PGSC0003DMT400015803 | Potato | nucleus | 30.74 | 32.68 |
| CDY00035 | Canola | nucleus | 39.63 | 32.42 |
| KRG96503 | Soybean | nucleus | 42.22 | 32.2 |
| Os01t0305900-01 | Rice | nucleus | 37.78 | 32.18 |
| AT5G49330.1 | Thale cress | nucleus | 40.74 | 32.16 |
| KRH69237 | Soybean | nucleus | 44.07 | 32.08 |
| CDX85403 | Canola | nucleus | 40.37 | 31.87 |
| CDX86237 | Canola | nucleus | 40.37 | 31.78 |
| Bra037419.1-P | Field mustard | nucleus | 40.37 | 31.78 |
| KRH68241 | Soybean | nucleus | 41.85 | 31.48 |
| PGSC0003DMT400034372 | Potato | nucleus | 31.11 | 31.34 |
| VIT_07s0005g01210.t01 | Wine grape | nucleus | 41.85 | 30.79 |
| Bra036145.1-P | Field mustard | nucleus | 39.26 | 30.55 |
| Zm00001d028842_P001 | Maize | nucleus | 37.78 | 30.45 |
| HORVU4Hr1G054420.3 | Barley | nucleus | 38.15 | 30.29 |
| TraesCS1D01G021700.1 | Wheat | nucleus | 35.19 | 30.25 |
| CDY49609 | Canola | nucleus | 38.89 | 30.09 |
| GSMUA_Achr5P21250_001 | Banana | nucleus | 35.56 | 29.91 |
| PGSC0003DMT400080427 | Potato | nucleus | 31.48 | 29.82 |
| Zm00001d047671_P001 | Maize | nucleus | 37.78 | 29.65 |
| TraesCS4B01G186000.1 | Wheat | nucleus | 37.78 | 29.48 |
| TraesCS4A01G118400.1 | Wheat | nucleus | 37.78 | 29.48 |
| EER92385 | Sorghum | nucleus | 38.52 | 29.21 |
| TraesCS4D01G187100.1 | Wheat | nucleus | 37.41 | 29.19 |
| PGSC0003DMT400031607 | Potato | nucleus | 29.26 | 28.94 |
| Zm00001d040621_P002 | Maize | nucleus | 37.78 | 28.81 |
| GSMUA_Achr8P10470_001 | Banana | nucleus | 39.26 | 28.57 |
| OQU86782 | Sorghum | nucleus | 38.15 | 28.53 |
| PGSC0003DMT400079416 | Potato | nucleus | 22.59 | 28.37 |
| TraesCS1B01G049700.1 | Wheat | nucleus | 33.33 | 28.04 |
| TraesCS1B01G023400.1 | Wheat | nucleus | 33.33 | 28.04 |
| TraesCS1B01G023500.1 | Wheat | nucleus | 32.59 | 27.41 |
| TraesCS1B01G005200.1 | Wheat | nucleus | 33.7 | 27.41 |
| TraesCS1A01G021500.1 | Wheat | nucleus | 34.07 | 27.3 |
| TraesCS1D01G020900.1 | Wheat | nucleus | 33.7 | 26.84 |
| PGSC0003DMT400014983 | Potato | nucleus | 29.26 | 24.46 |
| PGSC0003DMT400060236 | Potato | nucleus | 32.22 | 18.67 |
| PGSC0003DMT400030322 | Potato | nucleus | 1.48 | 2.44 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400011167 | EnsemblPlantsGene:PGSC0003DMG400004371 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF203 | PFAM:PF00249 | PFscan:PS51294 | PGSC:PGSC0003DMG400004371 | SEG:seg | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI000295A6DC | UniProt:M0ZZ52 | MapMan:15.5.2.1 | : | : |
Description
Myb 12 transcription factor [Source:PGSC_GENE;Acc:PGSC0003DMG400004371]
Coordinates
chr12:-:52670915..52674965
Molecular Weight (calculated)
31479.0 Da
IEP (calculated)
6.182
GRAVY (calculated)
-0.889
Length
270 amino acids
Sequence
(BLAST)
(BLAST)
001: MVRTPCCEKV GLKRGRWTVE EDERLTNYIQ ANGEGSWRTL PKNAGLLRCG KSCRLRWINY LKSDLKRGNI TSDEEAIIIK LRATLGNRWS LIAKHLPHRT
101: DNEIKNYWNS RLSRKVESLR IPSDEKLPQA VVELAKKGTQ QQIIKHRRKG KTKISGSNFR SETIVHITSS TPNMEKETIN TIPNGDSNAM EFYHNDDQML
201: WHDDIMLMDD KEAELDQDFI FNCLWSGEEE NLEINDNNNN NYNNEILNVD NHGTLDGWDW EYLGEMLNRE
101: DNEIKNYWNS RLSRKVESLR IPSDEKLPQA VVELAKKGTQ QQIIKHRRKG KTKISGSNFR SETIVHITSS TPNMEKETIN TIPNGDSNAM EFYHNDDQML
201: WHDDIMLMDD KEAELDQDFI FNCLWSGEEE NLEINDNNNN NYNNEILNVD NHGTLDGWDW EYLGEMLNRE
001: MGRAPCCEKV GIKRGRWTAE EDQILSNYIQ SNGEGSWRSL PKNAGLKRCG KSCRLRWINY LRSDLKRGNI TPEEEELVVK LHSTLGNRWS LIAGHLPGRT
101: DNEIKNYWNS HLSRKLHNFI RKPSISQDVS AVIMTNASSA PPPPQAKRRL GRTSRSAMKP KIHRTKTRKT KKTSAPPEPN ADVAGADKEA LMVESSGAEA
201: ELGRPCDYYG DDCNKNLMSI NGDNGVLTFD DDIIDLLLDE SDPGHLYTNT TCGGDGELHN IRDSEGARGF SDTWNQGNLD CLLQSCPSVE SFLNYDHQVN
301: DASTDEFIDW DCVWQEGSDN NLWHEKENPD SMVSWLLDGD DEATIGNSNC ENFGEPLDHD DESALVAWLL S
101: DNEIKNYWNS HLSRKLHNFI RKPSISQDVS AVIMTNASSA PPPPQAKRRL GRTSRSAMKP KIHRTKTRKT KKTSAPPEPN ADVAGADKEA LMVESSGAEA
201: ELGRPCDYYG DDCNKNLMSI NGDNGVLTFD DDIIDLLLDE SDPGHLYTNT TCGGDGELHN IRDSEGARGF SDTWNQGNLD CLLQSCPSVE SFLNYDHQVN
301: DASTDEFIDW DCVWQEGSDN NLWHEKENPD SMVSWLLDGD DEATIGNSNC ENFGEPLDHD DESALVAWLL S
Arabidopsis Description
MYB12Transcription factor MYB12 [Source:UniProtKB/Swiss-Prot;Acc:O22264]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.