Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400011167 | Potato | nucleus | 81.91 | 88.89 |
| KRG94424 | Soybean | nucleus | 22.18 | 70.65 |
| Solyc06g009710.2.1 | Tomato | nucleus | 67.58 | 66.67 |
| Solyc12g096200.1.1 | Tomato | nucleus | 25.6 | 60.0 |
| Solyc01g079620.2.1 | Tomato | nucleus | 52.56 | 45.56 |
| Solyc05g008250.1.1 | Tomato | nucleus | 25.26 | 41.57 |
| GSMUA_AchrUn_... | Banana | nucleus | 38.23 | 35.0 |
| Solyc01g111500.2.1 | Tomato | nucleus | 29.35 | 34.13 |
| CDY05636 | Canola | nucleus | 33.45 | 33.79 |
| KRG96503 | Soybean | nucleus | 40.61 | 33.62 |
| KRH31822 | Soybean | nucleus | 38.23 | 32.75 |
| KRH69237 | Soybean | nucleus | 41.3 | 32.61 |
| KRH68241 | Soybean | nucleus | 39.93 | 32.59 |
| Solyc10g055410.1.1 | Tomato | nucleus | 30.03 | 32.23 |
| CDY00035 | Canola | nucleus | 36.18 | 32.12 |
| VIT_07s0005g01210.t01 | Wine grape | nucleus | 39.93 | 31.88 |
| CDX85403 | Canola | nucleus | 37.2 | 31.87 |
| Os01t0305900-01 | Rice | nucleus | 34.47 | 31.86 |
| CDX86237 | Canola | nucleus | 37.2 | 31.78 |
| Bra037419.1-P | Field mustard | nucleus | 37.2 | 31.78 |
| HORVU4Hr1G054420.3 | Barley | nucleus | 36.86 | 31.76 |
| AT5G49330.1 | Thale cress | nucleus | 36.86 | 31.58 |
| Zm00001d028842_P001 | Maize | nucleus | 35.84 | 31.34 |
| Solyc06g065100.2.1 | Tomato | nucleus | 29.69 | 31.18 |
| TraesCS4B01G186000.1 | Wheat | nucleus | 36.52 | 30.92 |
| TraesCS4A01G118400.1 | Wheat | nucleus | 36.52 | 30.92 |
| TraesCS1D01G021700.1 | Wheat | nucleus | 33.11 | 30.89 |
| TraesCS4D01G187100.1 | Wheat | nucleus | 36.18 | 30.64 |
| Bra036145.1-P | Field mustard | nucleus | 36.18 | 30.55 |
| GSMUA_Achr5P21250_001 | Banana | nucleus | 33.45 | 30.53 |
| Zm00001d047671_P001 | Maize | nucleus | 35.84 | 30.52 |
| CDY49609 | Canola | nucleus | 35.49 | 29.8 |
| TraesCS1B01G049700.1 | Wheat | nucleus | 32.42 | 29.59 |
| TraesCS1B01G023400.1 | Wheat | nucleus | 32.42 | 29.59 |
| TraesCS1A01G021500.1 | Wheat | nucleus | 33.45 | 29.08 |
| GSMUA_Achr8P10470_001 | Banana | nucleus | 36.52 | 28.84 |
| EER92385 | Sorghum | nucleus | 34.81 | 28.65 |
| TraesCS1B01G005200.1 | Wheat | nucleus | 32.42 | 28.61 |
| TraesCS1D01G020900.1 | Wheat | nucleus | 33.11 | 28.61 |
| Zm00001d040621_P002 | Maize | nucleus | 34.47 | 28.53 |
| Solyc07g008010.2.1 | Tomato | nucleus | 20.48 | 28.44 |
| TraesCS1B01G023500.1 | Wheat | nucleus | 31.06 | 28.35 |
| OQU86782 | Sorghum | nucleus | 34.81 | 28.25 |
| Solyc08g082890.2.1 | Tomato | nucleus | 26.62 | 27.56 |
| Solyc08g005870.1.1 | Tomato | nucleus | 26.28 | 27.21 |
| Solyc01g005660.1.1 | Tomato | nucleus, plastid | 27.65 | 26.3 |
| Solyc08g008480.2.1 | Tomato | nucleus | 27.65 | 25.39 |
| Solyc12g049300.1.1 | Tomato | nucleus | 29.01 | 24.15 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 | GO:GO:0044212 | GO:GO:0045893 | InterPro:Homeobox-like_sf |
| InterPro:IPR017930 | UniProt:K4DFL5 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF203 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | EnsemblPlantsGene:Solyc12g049350.1 | EnsemblPlants:Solyc12g049350.1.1 |
| UniParc:UPI00027699ED | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr12:+:37018697..37021219
Molecular Weight (calculated)
33924.7 Da
IEP (calculated)
4.726
GRAVY (calculated)
-0.807
Length
293 amino acids
Sequence
(BLAST)
(BLAST)
001: MVRTPCCEKV GLKRGRWTIE EDERLTNYIQ ANGEGSWRTL PKNAGLLRCG KSCRLRWINY LKSDLKRGNI TSEEEAIIIK LRATLGNRWS LIAEYLPHRT
101: DNEIKNYWNS RLCRKVESLR IPSDEELPQA VVELAKKGKQ QQIIKQRHKG KTKISGSNFV SETIVHTTSS TPNIEKETVN TIPNGDNNAT EFDHNDDQML
201: WHDDIMLMDD EDAKLDQDFI FKCLWSDQGE SFEIIENNNN NNNNNEILNV DNHGTLDGWD WEYLDEMLNN EIENNNVSNI DPMNSDLVAW LLS
101: DNEIKNYWNS RLCRKVESLR IPSDEELPQA VVELAKKGKQ QQIIKQRHKG KTKISGSNFV SETIVHTTSS TPNIEKETVN TIPNGDNNAT EFDHNDDQML
201: WHDDIMLMDD EDAKLDQDFI FKCLWSDQGE SFEIIENNNN NNNNNEILNV DNHGTLDGWD WEYLDEMLNN EIENNNVSNI DPMNSDLVAW LLS
001: MGRAPCCEKV GIKRGRWTAE EDQILSNYIQ SNGEGSWRSL PKNAGLKRCG KSCRLRWINY LRSDLKRGNI TPEEEELVVK LHSTLGNRWS LIAGHLPGRT
101: DNEIKNYWNS HLSRKLHNFI RKPSISQDVS AVIMTNASSA PPPPQAKRRL GRTSRSAMKP KIHRTKTRKT KKTSAPPEPN ADVAGADKEA LMVESSGAEA
201: ELGRPCDYYG DDCNKNLMSI NGDNGVLTFD DDIIDLLLDE SDPGHLYTNT TCGGDGELHN IRDSEGARGF SDTWNQGNLD CLLQSCPSVE SFLNYDHQVN
301: DASTDEFIDW DCVWQEGSDN NLWHEKENPD SMVSWLLDGD DEATIGNSNC ENFGEPLDHD DESALVAWLL S
101: DNEIKNYWNS HLSRKLHNFI RKPSISQDVS AVIMTNASSA PPPPQAKRRL GRTSRSAMKP KIHRTKTRKT KKTSAPPEPN ADVAGADKEA LMVESSGAEA
201: ELGRPCDYYG DDCNKNLMSI NGDNGVLTFD DDIIDLLLDE SDPGHLYTNT TCGGDGELHN IRDSEGARGF SDTWNQGNLD CLLQSCPSVE SFLNYDHQVN
301: DASTDEFIDW DCVWQEGSDN NLWHEKENPD SMVSWLLDGD DEATIGNSNC ENFGEPLDHD DESALVAWLL S
Arabidopsis Description
MYB12Transcription factor MYB12 [Source:UniProtKB/Swiss-Prot;Acc:O22264]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.