Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG94424 | Soybean | nucleus | 19.89 | 79.35 |
| VIT_17s0000g02650.t01 | Wine grape | nucleus | 23.71 | 52.73 |
| KRH31822 | Soybean | nucleus | 42.78 | 45.91 |
| KRH69237 | Soybean | nucleus | 44.96 | 44.47 |
| GSMUA_AchrUn_... | Banana | nucleus | 38.69 | 44.38 |
| KRG96503 | Soybean | nucleus | 40.6 | 42.09 |
| GSMUA_Achr8P10470_001 | Banana | nucleus | 42.51 | 42.05 |
| TraesCS1D01G021700.1 | Wheat | nucleus | 35.97 | 42.04 |
| PGSC0003DMT400011167 | Potato | nucleus | 30.79 | 41.85 |
| Solyc06g009710.2.1 | Tomato | nucleus | 33.52 | 41.41 |
| KRH68241 | Soybean | nucleus | 39.51 | 40.39 |
| VIT_03s0038g02310.t01 | Wine grape | nucleus | 27.52 | 40.24 |
| VIT_04s0023g03710.t01 | Wine grape | nucleus | 26.43 | 40.08 |
| CDY05636 | Canola | nucleus | 31.61 | 40.0 |
| VIT_01s0011g04760.t01 | Wine grape | nucleus | 24.52 | 40.0 |
| Solyc12g049350.1.1 | Tomato | nucleus | 31.88 | 39.93 |
| PGSC0003DMT400018841 | Potato | nucleus | 32.7 | 39.6 |
| VIT_04s0008g01870.t01 | Wine grape | nucleus | 21.25 | 39.59 |
| Solyc01g079620.2.1 | Tomato | nucleus | 36.24 | 39.35 |
| TraesCS1B01G005200.1 | Wheat | nucleus | 35.42 | 39.16 |
| Os01t0305900-01 | Rice | nucleus | 33.79 | 39.12 |
| CDY00035 | Canola | nucleus | 34.88 | 38.79 |
| CDX85403 | Canola | nucleus | 35.97 | 38.6 |
| VIT_14s0006g01620.t01 | Wine grape | nucleus | 23.98 | 38.6 |
| AT5G49330.1 | Thale cress | nucleus | 35.97 | 38.6 |
| Bra037419.1-P | Field mustard | nucleus | 35.97 | 38.48 |
| CDX86237 | Canola | nucleus | 35.97 | 38.48 |
| Zm00001d040621_P002 | Maize | nucleus | 37.06 | 38.42 |
| HORVU4Hr1G054420.3 | Barley | nucleus | 35.42 | 38.24 |
| VIT_11s0016g01310.t01 | Wine grape | nucleus | 22.89 | 38.18 |
| TraesCS1B01G023400.1 | Wheat | nucleus | 33.24 | 38.01 |
| Zm00001d028842_P001 | Maize | nucleus | 34.6 | 37.91 |
| TraesCS4A01G118400.1 | Wheat | nucleus | 35.69 | 37.86 |
| TraesCS4B01G186000.1 | Wheat | nucleus | 35.69 | 37.86 |
| TraesCS1B01G049700.1 | Wheat | nucleus | 32.97 | 37.69 |
| TraesCS4D01G187100.1 | Wheat | nucleus | 35.42 | 37.57 |
| VIT_09s0002g01380.t01 | Wine grape | nucleus | 20.71 | 37.44 |
| VIT_18s0117g00200.t01 | Wine grape | nucleus | 23.71 | 37.34 |
| VIT_17s0000g02660.t01 | Wine grape | nucleus | 23.16 | 37.12 |
| GSMUA_Achr5P21250_001 | Banana | nucleus | 32.43 | 37.07 |
| CDY49609 | Canola | nucleus | 35.15 | 36.96 |
| Zm00001d047671_P001 | Maize | nucleus | 34.6 | 36.92 |
| TraesCS1B01G023500.1 | Wheat | nucleus | 32.15 | 36.76 |
| Bra036145.1-P | Field mustard | nucleus | 34.6 | 36.6 |
| OQU86782 | Sorghum | nucleus | 35.69 | 36.29 |
| PGSC0003DMT400023322 | Potato | nucleus | 35.69 | 36.09 |
| VIT_04s0008g01800.t01 | Wine grape | nucleus | 25.89 | 35.85 |
| VIT_13s0084g00530.t01 | Wine grape | nucleus | 25.61 | 35.74 |
| VIT_18s0117g00210.t01 | Wine grape | nucleus | 24.8 | 35.27 |
| TraesCS1A01G021500.1 | Wheat | nucleus | 32.15 | 35.01 |
| VIT_15s0046g00170.t01 | Wine grape | nucleus | 27.25 | 34.97 |
| EER92385 | Sorghum | nucleus | 33.52 | 34.55 |
| TraesCS1D01G020900.1 | Wheat | nucleus | 31.88 | 34.51 |
| VIT_04s0008g01840.t01 | Wine grape | nucleus | 20.71 | 33.63 |
| VIT_11s0016g05660.t01 | Wine grape | nucleus | 20.16 | 33.18 |
| VIT_17s0000g08480.t01 | Wine grape | nucleus | 19.35 | 32.87 |
| VIT_11s0016g05690.t01 | Wine grape | nucleus | 19.89 | 32.74 |
| VIT_14s0066g01220.t01 | Wine grape | nucleus | 19.35 | 32.72 |
| VIT_05s0077g01360.t01 | Wine grape | nucleus | 34.06 | 32.64 |
| VIT_11s0016g01300.t01 | Wine grape | nucleus | 26.7 | 32.56 |
| VIT_07s0130g00040.t01 | Wine grape | nucleus | 25.07 | 31.72 |
| VIT_04s0008g01830.t01 | Wine grape | nucleus | 23.98 | 31.21 |
| VIT_04s0008g01810.t01 | Wine grape | nucleus | 23.43 | 31.16 |
| VIT_01s0127g00730.t01 | Wine grape | nucleus | 18.53 | 30.91 |
| VIT_11s0016g01320.t01 | Wine grape | nucleus | 23.71 | 30.63 |
| VIT_04s0008g01820.t01 | Wine grape | nucleus | 23.98 | 29.63 |
| VIT_06s0004g00570.t01 | Wine grape | nucleus, plastid | 24.8 | 29.17 |
| VIT_09s0002g01410.t01 | Wine grape | nucleus | 23.43 | 29.05 |
| VIT_09s0002g01400.t01 | Wine grape | nucleus | 26.16 | 27.99 |
| VIT_08s0007g07230.t01 | Wine grape | nucleus | 22.89 | 26.25 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100260656 | wikigene:100260656 | MapMan:15.5.2.1 | ProteinID:ACJ50529 | ProteinID:ACJ50529.1 |
| ProteinID:ACT88298 | ProteinID:ACT88298.1 | ProteinID:ACV81697 | ProteinID:ACV81697.1 | ProteinID:CBI36927 | ProteinID:CBI36927.3 |
| UniProt:D7U2G1 | EMBL:FJ418175 | EMBL:FJ948477 | EMBL:FN596502 | GO:GO:0000981 | GO:GO:0001135 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 | GO:GO:0044212 |
| GO:GO:0045893 | EMBL:GQ423422 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | EntrezGene:MYB12 | wikigene:MYB12 |
| InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF595 | InterPro:SANT/Myb |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI00015CB120 | ArrayExpress:VIT_07s0005g01210 | EnsemblPlantsGene:VIT_07s0005g01210 | EnsemblPlants:VIT_07s0005g01210.t01 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr7:-:3730465..3732879
Molecular Weight (calculated)
40875.5 Da
IEP (calculated)
4.702
GRAVY (calculated)
-0.749
Length
367 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRAPCCEKV GLKKGRWTAE EDEVLVKYIQ ANGEGSWRSL PKNAGLLRCG KSCRLRWINY LRADLKRGNF SEEEEEIIIK LHASLGNRWS MIAGQLPGRT
101: DNEIKNYWNS HLSRKVHSFR RLTNEGPSMV IDLAKVTTAH KRKVGRTSRW AMKKNRSDKS IREDVNKSSL EKPKGDDDGN GVIAEKETRS ETMTGDLYAQ
201: VNEEENPELM ASHLLGCGGR MFGEGSETFG PFRVPEVEGL CFSENMESGV LVDGGGLVSS GTEERASGAT CSNKTTPFGG DVEGRNLSSD NGDQTVDQWP
301: SCSSPTSYFD DWNWESSAVN GQELWDEKEE MLSWLWEDSD GGEVECETFG GDLDCEKQNA MVAWLLS
101: DNEIKNYWNS HLSRKVHSFR RLTNEGPSMV IDLAKVTTAH KRKVGRTSRW AMKKNRSDKS IREDVNKSSL EKPKGDDDGN GVIAEKETRS ETMTGDLYAQ
201: VNEEENPELM ASHLLGCGGR MFGEGSETFG PFRVPEVEGL CFSENMESGV LVDGGGLVSS GTEERASGAT CSNKTTPFGG DVEGRNLSSD NGDQTVDQWP
301: SCSSPTSYFD DWNWESSAVN GQELWDEKEE MLSWLWEDSD GGEVECETFG GDLDCEKQNA MVAWLLS
001: MGRAPCCEKV GIKRGRWTAE EDQILSNYIQ SNGEGSWRSL PKNAGLKRCG KSCRLRWINY LRSDLKRGNI TPEEEELVVK LHSTLGNRWS LIAGHLPGRT
101: DNEIKNYWNS HLSRKLHNFI RKPSISQDVS AVIMTNASSA PPPPQAKRRL GRTSRSAMKP KIHRTKTRKT KKTSAPPEPN ADVAGADKEA LMVESSGAEA
201: ELGRPCDYYG DDCNKNLMSI NGDNGVLTFD DDIIDLLLDE SDPGHLYTNT TCGGDGELHN IRDSEGARGF SDTWNQGNLD CLLQSCPSVE SFLNYDHQVN
301: DASTDEFIDW DCVWQEGSDN NLWHEKENPD SMVSWLLDGD DEATIGNSNC ENFGEPLDHD DESALVAWLL S
101: DNEIKNYWNS HLSRKLHNFI RKPSISQDVS AVIMTNASSA PPPPQAKRRL GRTSRSAMKP KIHRTKTRKT KKTSAPPEPN ADVAGADKEA LMVESSGAEA
201: ELGRPCDYYG DDCNKNLMSI NGDNGVLTFD DDIIDLLLDE SDPGHLYTNT TCGGDGELHN IRDSEGARGF SDTWNQGNLD CLLQSCPSVE SFLNYDHQVN
301: DASTDEFIDW DCVWQEGSDN NLWHEKENPD SMVSWLLDGD DEATIGNSNC ENFGEPLDHD DESALVAWLL S
Arabidopsis Description
MYB12Transcription factor MYB12 [Source:UniProtKB/Swiss-Prot;Acc:O22264]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.