Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_11s0016g05660.t01 | Wine grape | nucleus | 85.65 | 85.65 |
| AT5G52600.1 | Thale cress | nucleus | 48.88 | 54.23 |
| CDY51833 | Canola | nucleus | 47.09 | 52.76 |
| CDY27055 | Canola | nucleus | 46.64 | 52.53 |
| Bra022602.1-P | Field mustard | nucleus | 46.64 | 52.53 |
| CDY56151 | Canola | nucleus | 46.64 | 52.26 |
| Bra029113.1-P | Field mustard | nucleus | 46.64 | 52.26 |
| CDY65324 | Canola | nucleus | 47.53 | 52.22 |
| PGSC0003DMT400079416 | Potato | nucleus | 46.64 | 48.37 |
| Solyc07g008010.2.1 | Tomato | nucleus | 45.74 | 48.34 |
| VIT_17s0000g02650.t01 | Wine grape | nucleus | 31.39 | 42.42 |
| VIT_04s0008g01870.t01 | Wine grape | nucleus | 31.84 | 36.04 |
| VIT_09s0002g01380.t01 | Wine grape | nucleus | 32.74 | 35.96 |
| VIT_14s0066g01220.t01 | Wine grape | nucleus | 34.08 | 35.02 |
| VIT_11s0016g01310.t01 | Wine grape | nucleus | 34.53 | 35.0 |
| VIT_04s0008g01840.t01 | Wine grape | nucleus | 34.98 | 34.51 |
| VIT_01s0011g04760.t01 | Wine grape | nucleus | 33.18 | 32.89 |
| VIT_17s0000g08480.t01 | Wine grape | nucleus | 31.84 | 32.87 |
| VIT_17s0000g02660.t01 | Wine grape | nucleus | 33.18 | 32.31 |
| VIT_14s0006g01620.t01 | Wine grape | nucleus | 31.84 | 31.14 |
| VIT_01s0127g00730.t01 | Wine grape | nucleus | 30.49 | 30.91 |
| GSMUA_Achr3P07950_001 | Banana | nucleus | 32.74 | 30.67 |
| VIT_04s0023g03710.t01 | Wine grape | nucleus | 32.74 | 30.17 |
| VIT_03s0038g02310.t01 | Wine grape | nucleus | 33.63 | 29.88 |
| VIT_04s0008g01800.t01 | Wine grape | nucleus | 35.43 | 29.81 |
| GSMUA_Achr3P27700_001 | Banana | nucleus | 35.87 | 29.2 |
| VIT_18s0117g00200.t01 | Wine grape | nucleus | 30.49 | 29.18 |
| VIT_11s0016g01320.t01 | Wine grape | nucleus | 36.32 | 28.52 |
| VIT_04s0008g01810.t01 | Wine grape | nucleus | 34.98 | 28.26 |
| VIT_13s0084g00530.t01 | Wine grape | nucleus | 31.84 | 27.0 |
| VIT_04s0008g01830.t01 | Wine grape | nucleus | 34.08 | 26.95 |
| VIT_15s0046g00170.t01 | Wine grape | nucleus | 34.53 | 26.92 |
| VIT_18s0117g00210.t01 | Wine grape | nucleus | 30.94 | 26.74 |
| VIT_04s0008g01820.t01 | Wine grape | nucleus | 34.98 | 26.26 |
| VIT_11s0016g01300.t01 | Wine grape | nucleus | 33.18 | 24.58 |
| VIT_08s0007g07230.t01 | Wine grape | nucleus | 34.53 | 24.06 |
| VIT_06s0004g00570.t01 | Wine grape | nucleus, plastid | 32.74 | 23.4 |
| VIT_09s0002g01410.t01 | Wine grape | nucleus | 30.94 | 23.31 |
| VIT_07s0130g00040.t01 | Wine grape | nucleus | 30.04 | 23.1 |
| VIT_09s0002g01400.t01 | Wine grape | nucleus | 33.18 | 21.57 |
| VIT_07s0005g01210.t01 | Wine grape | nucleus | 32.74 | 19.89 |
| VIT_05s0077g01360.t01 | Wine grape | nucleus | 31.84 | 18.54 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100266468 | wikigene:100266468 | MapMan:15.5.2.1 | ProteinID:CCB51603 | ProteinID:CCB51603.1 |
| UniProt:F6HHA7 | EMBL:FN595756 | GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 | GO:GO:0044212 | InterPro:Homeobox-like_sf | InterPro:IPR017930 |
| EntrezGene:LOC100266468 | wikigene:LOC100266468 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF662 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0002108A95 | ArrayExpress:VIT_11s0016g05690 |
| EnsemblPlantsGene:VIT_11s0016g05690 | EnsemblPlants:VIT_11s0016g05690.t01 | RefSeq:XP_002282349 | RefSeq:XP_002282349.1 | RefSeq:XP_002282349.2 | SEG:seg |
Description
No Description!
Coordinates
chr11:+:5139664..5140550
Molecular Weight (calculated)
25610.3 Da
IEP (calculated)
10.116
GRAVY (calculated)
-1.062
Length
223 amino acids
Sequence
(BLAST)
(BLAST)
001: MEETGGLVPK PRVKKGLWKP EEDLLLKKYV EAHGEGKWDA VSERTGLMRS GKSCRLRWKN YLRPNKKRGG ISKDEEDIII RMHKLLGNRW SLIAGRLPGR
101: TDNDVKNYWN THLNKGRSGG KRKSPSSDDN AGHKRRRGLL NSQPVLDGSP EKRSEGSDGR KQEEFHNIPD NNPRMEDTKS FNHDIKSPSL PSVKDTTFLF
201: YDEPFISFSD AFVLFETMGE IEW
101: TDNDVKNYWN THLNKGRSGG KRKSPSSDDN AGHKRRRGLL NSQPVLDGSP EKRSEGSDGR KQEEFHNIPD NNPRMEDTKS FNHDIKSPSL PSVKDTTFLF
201: YDEPFISFSD AFVLFETMGE IEW
001: MECKREEGKS YVKRGLWKPE EDMILKSYVE THGEGNWADI SRRSGLKRGG KSCRLRWKNY LRPNIKRGSM SPQEQDLIIR MHKLLGNRWS LIAGRLPGRT
101: DNEVKNYWNT HLNKKPNSRR QNAPESIVGA TPFTDKPVMS TELRRSHGEG GEEESNTWME ETNHFGYDVH VGSPLPLISH YPDNTLVFDP CFSFTDFFPL
201: L
101: DNEVKNYWNT HLNKKPNSRR QNAPESIVGA TPFTDKPVMS TELRRSHGEG GEEESNTWME ETNHFGYDVH VGSPLPLISH YPDNTLVFDP CFSFTDFFPL
201: L
Arabidopsis Description
MYB82Transcription factor MYB82 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTF7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.